RNA–Protein interactions for RNA: ENST00000558452.1

RNF31-206, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-206	ENST00000558452	OR2T35	Q8NGX2	323 aa		10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	CASTOR1	Q8WTX7	329 aa		10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	IL1F10	Q8WWZ1	152 aa		10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	EDARADD	Q8WWZ3	215 aa		10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	NOL4L	Q96MY1	436 aa	Predicted RBP	10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	PDCD10	Q9BUL8	212 aa		10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	COMMD9	Q9P000	198 aa		10.15	□□□□□ -0.78
RNF31-206	ENST00000558452	IGKV1-6	A0A0C4DH72	117 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	LINC01548	A6NM66	108 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	ITGB1BP1	O14713	200 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	GNRHR	P30968	328 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	CEACAM6	P40199	344 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	IFITM2	Q01629	132 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	ZNF833P	Q6ZTB9	187 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	ZNF329	Q86UD4	541 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	FOXRED2	Q8IWF2	684 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	LGI3	Q8N145	548 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	STPG2	Q8N412	459 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	BVES	Q8NE79	360 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	OR8H1	Q8NGG4	311 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	RBMXL1	Q96E39	390 aa	Known RBP	10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	S1PR3	Q99500	378 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	NABP2	Q9BQ15	211 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	ZFP57	Q9NU63	452 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	PIPOX	Q9P0Z9	390 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	LINC00527	Q9UJ94	153 aa		10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	RBM7	Q9Y580	266 aa	Known RBP	10.14	□□□□□ -0.79
RNF31-206	ENST00000558452	SAA2-SAA4	A0A096LPE2	208 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	MPPED1	O15442	326 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	SAA2	P0DJI9	122 aa	Predicted RBP	10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	PF4V1	P10720	104 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	F2RL1	P55085	397 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	SUPT4H1	P63272	117 aa	Known RBP	10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	BEAN1	Q3B7T3	259 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	FAM71E2	Q8N5Q1	922 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	TCTEX1D1	Q8N7M0	179 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	SECTM1	Q8WVN6	248 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	IL22RA2	Q969J5	263 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	RASL11B	Q9BPW5	248 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	NMES1	Q9C002	83 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	IFI27L2	Q9H2X8	130 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	SLA2	Q9H6Q3	261 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	RDH8	Q9NYR8	311 aa		10.13	□□□□□ -0.79
RNF31-206	ENST00000558452	C3orf85	A0A1B0GTC6	90 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	HMSD	A8MTL9	139 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	AP4M1	O00189	453 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	ST8SIA5	O15466	376 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	PET100	P0DJ07	73 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	PI3	P19957	117 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	GPR12	P47775	334 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	H2BFS	P57053	126 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	SLC35B1	P78383	322 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	OXLD1	Q5BKU9	147 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	KHDC1L	Q5JSQ8	128 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	KPRP	Q5T749	579 aa	Predicted RBP	10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	FAM71F2	Q6NXP2	309 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	COMMD1	Q8N668	190 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	WFDC9	Q8NEX5	89 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	GRPEL2	Q8TAA5	225 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	ZNF251	Q9BRH9	671 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	MRPL20	Q9BYC9	149 aa	Known RBP	10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	TMED3	Q9Y3Q3	217 aa		10.12	□□□□□ -0.79
RNF31-206	ENST00000558452	C5orf51	A6NDU8	294 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452		H0Y980	276 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	RAB29	O14966	203 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	ATG12	O94817	140 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	PF4	P02776	101 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	CD33	P20138	364 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	CATR1	Q13166	79 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	TMEM187	Q14656	261 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	ZNF645	Q8N7E2	425 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	ABHD14B	Q96IU4	210 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	C2orf50	Q96LR7	162 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	SPIN2A	Q99865	258 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	SPIN2B	Q9BPZ2	258 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	AGMAT	Q9BSE5	352 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	PARP12	Q9H0J9	701 aa	Known RBP	10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	TMEM222	Q9H0R3	208 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	OR1A1	Q9P1Q5	309 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	GAB2	Q9UQC2	676 aa		10.11	□□□□□ -0.79
RNF31-206	ENST00000558452	PGLYRP1	O75594	196 aa	Predicted RBP	10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	OR5AC1	P0C628	307 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	SLC25A4	P12235	298 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	RPA2	P15927	270 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	F2R	P25116	425 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	RPL23A	P62750	156 aa	Known RBP	10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	MMD	Q15546	238 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	PHLDA2	Q53GA4	152 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	RPL39P5	Q59GN2	51 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	TEX38	Q6PEX7	206 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	TMEM65	Q6PI78	240 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	ZNF818P	Q6ZRF7	136 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	TBC1D26	Q86UD7	250 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	SLC7A5P1	Q8MH63	180 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	THAP6	Q8TBB0	222 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	RITA1	Q96K30	269 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	TMEM56	Q96MV1	263 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	HSPB9	Q9BQS6	159 aa		10.1	□□□□□ -0.79
RNF31-206	ENST00000558452	GON7	Q9BXV9	100 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms