RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 FAM240BA0A1B0GVZ2 78 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 M0QZK8 103 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 RRHO14718 337 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 ARPC1BO15143 372 aaKnown RBP9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 S1PR2O95136 353 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 NDUFB6O95139 128 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 AMY1AP04745 511 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 LGALS7P47929 136 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 RIPPLY3P57055 190 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 ASAH1Q13510 395 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 C11orf88Q6PI97 169 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 Q6ZSV7 163 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 NPBQ8NG41 125 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 TMEM230Q96A57 120 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 TP53RKQ96S44 253 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 RNF5Q99942 180 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 NAA60Q9H7X0 242 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 BEX1Q9HBH7 125 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 SIGLEC9Q9Y336 463 aa9.53□□□□□ -0.88
HMGB1P8-201ENST00000558211 PLXNB1O43157 2135 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 TRAV6A0A075B6T7 132 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 FGF16O43320 207 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 HPRT1P00492 218 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 HRASP01112 189 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 IGLV2-23P01705 113 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 SERPINE2P07093 398 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 OR5AC1P0C628 307 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 VSIG10L2P0DP72 767 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 SLURP1P55000 103 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 RAG2P55895 527 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 DEFA1P59665 94 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 DEFA3P59666 94 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 C5orf64Q2M2E5 130 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 TRIM16LQ309B1 348 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 VMA21Q3ZAQ7 101 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 LIN54Q6MZP7 749 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 SGPP2Q8IWX5 399 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 CENPSQ8N2Z9 138 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 ENKURQ8TC29 256 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 CD300LFQ8TDQ1 290 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 ZFAND2BQ8WV99 257 aa9.52□□□□□ -0.89
HMGB1P8-201ENST00000558211 CRYM-AS1A6NIL9 109 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 H0Y980 276 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 FCN1O00602 326 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 RBFOX2O43251 390 aaKnown RBP eCLIP9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 NDUFA3O95167 84 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 KRASP01116 189 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 TCRBP04435 133 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 SAA1P0DJI8 122 aaPredicted RBP9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 HKR1P10072 659 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 SLC6A1P30531 599 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 G6PCP35575 357 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 GNB1P62873 340 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 TMEM95Q3KNT9 176 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 FAM71E2Q8N5Q1 922 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 TCTEX1D1Q8N7M0 179 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 DMBX1Q8NFW5 382 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 TMEM158Q8WZ71 300 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 R3HDM4Q96D70 268 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 C19orf24Q9BVV8 132 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 ZNF702PQ9H963 129 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 KCNIP3Q9Y2W7 256 aa9.51□□□□□ -0.89
HMGB1P8-201ENST00000558211 LINC01548A6NM66 108 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 TSPAN9O75954 239 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 SPDEFO95238 335 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 NQO2P16083 231 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 ANXA7P20073 488 aaKnown RBP9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 MDKP21741 143 aaPredicted RBP9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 RAB25P57735 213 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 TAS2R31P59538 309 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 UBE2KP61086 200 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 ERVK-16P61578 105 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 PJVKQ0ZLH3 352 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 OR4F5Q8NH21 305 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 OR2T6Q8NHC8 308 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 ABHD5Q8WTS1 349 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 CASTOR1Q8WTX7 329 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 HSPB9Q9BQS6 159 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 C20orf85Q9H1P6 137 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 RANBP3Q9H6Z4 567 aaPredicted RBP9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 PLEKHA2Q9HB19 425 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 LINC00527Q9UJ94 153 aa9.5□□□□□ -0.89
HMGB1P8-201ENST00000558211 OR2A4O95047 310 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 NDUFA7O95182 113 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 CNIH1O95406 144 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 CA2P00918 260 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 IGKV1-39P01597 117 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 IGKV1D-39P04432 117 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 CRYGBP07316 175 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 ANXA3P12429 323 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 VDAC2P45880 294 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 SUPT4H1P63272 117 aaKnown RBP9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 DHODHQ02127 395 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 PPP1R1AQ13522 171 aa9.49□□□□□ -0.89
HMGB1P8-201ENST00000558211 TMEM128Q5BJH2 165 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms