RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 FCN1O00602 326 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 ACTL6BO94805 426 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 CNIH1O95406 144 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 SFT2D2O95562 160 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 CA2P00918 260 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 KRASP01116 189 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 IGF1P05019 195 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 IL6RP08887 468 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-204ENST00000558172 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 MDKP21741 143 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-204ENST00000558172 SUPT4H1P63272 117 aaKnown RBP8.28□□□□□ -1.08
LRRC28-204ENST00000558172 CX3CL1P78423 397 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 TMEM187Q14656 261 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 PRSS8Q16651 343 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 SSX9Q7RTT3 188 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 H2BFWTQ7Z2G1 175 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 ZNF695Q8IW36 515 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 VKORC1L1Q8N0U8 176 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 CHPT1Q8WUD6 406 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 SEC22AQ96IW7 307 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 TMEM56Q96MV1 263 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 CLCC1Q96S66 551 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 C20orf85Q9H1P6 137 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 OR51J1Q9H342 316 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 SERTAD4Q9NUC0 356 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 TMEM140Q9NV12 185 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 FLVCR2Q9UPI3 526 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 TMEM56-RWDD3S4R434 201 aa8.28□□□□□ -1.08
LRRC28-204ENST00000558172 UPK2O00526 184 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 SNAPC5O75971 98 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 IGKV1-39P01597 117 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 IGKV1D-39P04432 117 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 OR4E1P0C645 316 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 VAMP1P23763 118 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 G6PCP35575 357 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 MECP2P51608 486 aaKnown RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 RAB25P57735 213 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 PROK1P58294 105 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 RPL8P62917 257 aaKnown RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 TMEM267Q0VDI3 215 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 DCTN2Q13561 401 aaKnown RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 FXYD3Q14802 87 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 AWAT1Q58HT5 328 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 NRARPQ7Z6K4 114 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 FAM219AQ8IW50 185 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 SELENOHQ8IZQ5 122 aaKnown RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 LGI3Q8N145 548 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 TAF15Q92804 592 aaKnown RBP eCLIP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 RBPMSQ93062 196 aaKnown RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 RRNAD1Q96FB5 475 aaKnown RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 TMEM68Q96MH6 324 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 HSPB9Q9BQS6 159 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 WNT10AQ9GZT5 417 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 ZNF430Q9H8G1 570 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-204ENST00000558172 TPSG1Q9NRR2 321 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 FKBP11Q9NYL4 201 aa8.27□□□□□ -1.09
LRRC28-204ENST00000558172 TRAV6A0A075B6T7 132 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 DUXBA0A1W2PPF3 345 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 C9orf170A2RU37 121 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 LINC01548A6NM66 108 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 HLA-GP17693 338 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 ANXA7P20073 488 aaKnown RBP8.26□□□□□ -1.09
LRRC28-204ENST00000558172 VDAC1P21796 283 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 AKR1C2P52895 323 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 CRIP2P52943 208 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-204ENST00000558172 GNB1P62873 340 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 SLC35B1P78383 322 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 PJVKQ0ZLH3 352 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 PPP1R1AQ13522 171 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 TNXAQ16473 311 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 C4orf46Q504U0 113 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 AKIRIN2Q53H80 203 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 TMEM268Q5VZI3 342 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 PLET1Q6UQ28 207 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 C12orf54Q6X4T0 127 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 CENPVQ7Z7K6 275 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-204ENST00000558172 LYG2Q86SG7 212 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 STPG2Q8N412 459 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 LRTM2Q8N967 370 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 SGMS2Q8NHU3 365 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 RNASE11Q8TAA1 199 aaKnown RBP8.26□□□□□ -1.09
LRRC28-204ENST00000558172 ABHD5Q8WTS1 349 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 ARPC1AQ92747 370 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
LRRC28-204ENST00000558172 PARP11Q9NR21 331 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 NUDT15Q9NV35 164 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 STAB1Q9NY15 2570 aa8.26□□□□□ -1.09
LRRC28-204ENST00000558172 FBN1P35555 2871 aaKnown RBP8.26□□□□□ -1.09
LRRC28-204ENST00000558172 A0A0B4J2A0 478 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 PSMB11A5LHX3 300 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 ATP6V0E1O15342 81 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 DUS4LO95620 317 aaKnown RBP8.25□□□□□ -1.09
LRRC28-204ENST00000558172 PTTG1O95997 202 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 IGKV1-5P01602 117 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 HLA-AP01891 365 aaKnown RBP8.25□□□□□ -1.09
LRRC28-204ENST00000558172 RPL27AP46776 148 aaKnown RBP8.25□□□□□ -1.09
LRRC28-204ENST00000558172 DHRS2Q13268 280 aa8.25□□□□□ -1.09
LRRC28-204ENST00000558172 TMEM95Q3KNT9 176 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms