RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 TMEM140Q9NV12 185 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 TRAV3A0A0B4J244 114 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 OR2A4O95047 310 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 IL6RP08887 468 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-211ENST00000556536 RAG2P55895 527 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 ERVK-16P61578 105 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 IZUMO4Q1ZYL8 232 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 Q6ZSV7 163 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 ZNF695Q8IW36 515 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
TUBB3-211ENST00000556536 OR2A7Q96R45 310 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 HSPB9Q9BQS6 159 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 AIFM2Q9BRQ8 373 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 ZNF702PQ9H963 129 aa13.79□□□□□ -0.2
TUBB3-211ENST00000556536 A0A0G2JRQ6 117 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 LINC01548A6NM66 108 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 KBTBD11O94819 623 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 DUS4LO95620 317 aaKnown RBP13.78□□□□□ -0.2
TUBB3-211ENST00000556536 CA2P00918 260 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 IL5P05113 134 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 CRYBA1P05813 215 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 P0C879 139 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 RPL15P61313 204 aaKnown RBP13.78□□□□□ -0.2
TUBB3-211ENST00000556536 SSBP2P81877 361 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-211ENST00000556536 OXA1LQ15070 435 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 PRSS8Q16651 343 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 C9orf152Q5JTZ5 239 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 LYZL2Q7Z4W2 148 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 PPP1R27Q86WC6 154 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 LGI3Q8N145 548 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 SLC35G3Q8N808 338 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 TMEM167AQ8TBQ9 72 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 IL22RA2Q969J5 263 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 C19orf24Q9BVV8 132 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 RANBP3Q9H6Z4 567 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-211ENST00000556536 ZNF430Q9H8G1 570 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-211ENST00000556536 BET1LQ9NYM9 111 aa13.78□□□□□ -0.2
TUBB3-211ENST00000556536 IGHV7-81A0A0B4J1V7 117 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 UPK2O00526 184 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 HLA-DRB1P01911 266 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 SRPXP78539 464 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-211ENST00000556536 LRTM2Q8N967 370 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 VSTM2AQ8TAG5 236 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 ZNF431Q8TF32 576 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-211ENST00000556536 PRSS22Q9GZN4 317 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 NSG2Q9Y328 171 aa13.77□□□□□ -0.21
TUBB3-211ENST00000556536 A0A0B4J293 547 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 TSPAN9O75954 239 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 DHFRP00374 187 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 MYOD1P15172 320 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 AKR1C2P52895 323 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 GNB1P62873 340 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 CX3CL1P78423 397 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 NDPQ00604 133 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 TMEM95Q3KNT9 176 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 H2BFWTQ7Z2G1 175 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 Q8N2B8 174 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 OR4A5Q8NH83 315 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 CHPT1Q8WUD6 406 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 MITD1Q8WV92 249 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 GPR146Q96CH1 333 aa13.76□□□□□ -0.21
TUBB3-211ENST00000556536 A0A0B4J2A0 478 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 PRAF2O60831 178 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 ATG12O94817 140 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 Q6ZRM9 215 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 CADM3Q8N126 398 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 COQ8AQ8NI60 647 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 RNASE11Q8TAA1 199 aaKnown RBP13.75□□□□□ -0.21
TUBB3-211ENST00000556536 RRNAD1Q96FB5 475 aaKnown RBP13.75□□□□□ -0.21
TUBB3-211ENST00000556536 SHPKQ9UHJ6 478 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 MMP24Q9Y5R2 645 aa13.75□□□□□ -0.21
TUBB3-211ENST00000556536 DBX1A6NMT0 343 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 ADAP1O75689 374 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 NDUFA7O95182 113 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 IGHG2P01859 326 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 HOXB5P09067 269 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 OR2B8PP59922 312 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 RPL8P62917 257 aaKnown RBP13.74□□□□□ -0.21
TUBB3-211ENST00000556536 TNXAQ16473 311 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 NMSQ5H8A3 153 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 C10orf55Q5SWW7 151 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 ZNF562Q6V9R5 426 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 MMD2Q8IY49 270 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 LSM10Q969L4 123 aaKnown RBP13.74□□□□□ -0.21
TUBB3-211ENST00000556536 PHB2Q99623 299 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 OR51J1Q9H342 316 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 C16orf95Q9H693 158 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 FBXO7Q9Y3I1 522 aa13.74□□□□□ -0.21
TUBB3-211ENST00000556536 CNIH1O95406 144 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 HKR1P10072 659 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 EGR2P11161 476 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-211ENST00000556536 HLA-GP17693 338 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 VDAC1P21796 283 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 FXYD3Q14802 87 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 TATDN3Q17R31 274 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 FAM219AQ8IW50 185 aa13.73□□□□□ -0.21
TUBB3-211ENST00000556536 C12orf45Q8N5I9 185 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms