RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 RNASE10Q5GAN6 216 aaKnown RBP7.53□□□□□ -1.2
SRP54-210ENST00000556380 ASPHD1Q5U4P2 390 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 LPCAT3Q6P1A2 487 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 IDO2Q6ZQW0 420 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 C18orf65Q6ZTR6 163 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 VKORC1L1Q8N0U8 176 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
SRP54-210ENST00000556380 FAM110DQ8TAY7 271 aaPredicted RBP7.53□□□□□ -1.2
SRP54-210ENST00000556380 FAM103A1Q9BTL3 118 aaKnown RBP7.53□□□□□ -1.2
SRP54-210ENST00000556380 A0A1W2PRX2 142 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 HPRT1P00492 218 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 IFNA6P05013 189 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 F2RP25116 425 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 CDX1P47902 265 aaPredicted RBP7.52□□□□□ -1.21
SRP54-210ENST00000556380 TAS2R31P59538 309 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 RND3P61587 244 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 CATR1Q13166 79 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 PHLDA2Q53GA4 152 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 LINC00299Q6ZSB3 139 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 CMTM1Q8IZ96 169 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 SLC38A6Q8IZM9 456 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 CADM3Q8N126 398 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 TCTEX1D1Q8N7M0 179 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 LFNGQ8NES3 379 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 WFDC9Q8NEX5 89 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 OR51H1Q8NH63 302 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 TMEM167AQ8TBQ9 72 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 DEDD2Q8WXF8 326 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 ARPC1AQ92747 370 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 TRIM63Q969Q1 353 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 R3HDM4Q96D70 268 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 RHOVQ96L33 236 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 THAP7Q9BT49 309 aaPredicted RBP7.52□□□□□ -1.21
SRP54-210ENST00000556380 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 ZNF430Q9H8G1 570 aaPredicted RBP7.52□□□□□ -1.21
SRP54-210ENST00000556380 PLEKHA2Q9HB19 425 aa7.52□□□□□ -1.21
SRP54-210ENST00000556380 A0A1B0GW64 132 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 OR2A4O95047 310 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 S1PR2O95136 353 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 CNIH1O95406 144 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 HRASP01112 189 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 RLN1P04808 185 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 AKAIN1P0CW23 69 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 NQO2P16083 231 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 RAB9AP51151 201 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 TMEM267Q0VDI3 215 aaPredicted RBP7.51□□□□□ -1.21
SRP54-210ENST00000556380 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
SRP54-210ENST00000556380 MEF2DQ14814 521 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 ECSCRQ19T08 205 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 CXorf66Q5JRM2 361 aaPredicted RBP7.51□□□□□ -1.21
SRP54-210ENST00000556380 FAAP20Q6NZ36 180 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 ETV3LQ6ZN32 361 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 MMD2Q8IY49 270 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 ZNF491Q8N8L2 437 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 OR4F17Q8NGA8 305 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 OR4C16Q8NGL9 310 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 OR13C8Q8NGS7 320 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 ZNF486Q96H40 463 aaPredicted RBP7.51□□□□□ -1.21
SRP54-210ENST00000556380 OR2A7Q96R45 310 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 OR4F4Q96R69 305 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 BATF3Q9NR55 127 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 SLC2A9Q9NRM0 540 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 FAM212BQ9NTI7 297 aaPredicted RBP7.51□□□□□ -1.21
SRP54-210ENST00000556380 SLC2A8Q9NY64 477 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 BET1LQ9NYM9 111 aa7.51□□□□□ -1.21
SRP54-210ENST00000556380 FOXA2Q9Y261 457 aaPredicted RBP7.51□□□□□ -1.21
SRP54-210ENST00000556380 TRAV3A0A0B4J244 114 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 A0A1W2PN81 502 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 MSGN1A6NI15 193 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 E7EUB6 86 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 MPPED1O15442 326 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 KBTBD11O94819 623 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 BRI3O95415 125 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 IGKV1-39P01597 117 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 IGKV1D-39P04432 117 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 PI3P19957 117 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 SLC6A1P30531 599 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 CHRNA7P36544 502 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 ECI1P42126 302 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 LPAR6P43657 344 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 GNB1P62873 340 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 PYDC2Q56P42 97 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 SPANXN2Q5MJ10 180 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 C10orf55Q5SWW7 151 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 OR4A47Q6IF82 309 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 UNQ5815/PRO19632Q6UWF5 114 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 TBC1D26Q86UD7 250 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 ZNF695Q8IW36 515 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 Q8N402 240 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 OR5M8Q8NGP6 311 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 GRPEL2Q8TAA5 225 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 VSTM2AQ8TAG5 236 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 ABHD5Q8WTS1 349 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
SRP54-210ENST00000556380 UBE2E2Q96LR5 201 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 TMEM68Q96MH6 324 aa7.5□□□□□ -1.21
SRP54-210ENST00000556380 P2RX4Q99571 388 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms