RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PTPRQQ9UMZ3 2332 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 PMS2P11Q13670 270 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 LRRC75BQ2VPJ9 315 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 WDR31Q8NA23 367 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 CLDND2Q8NHS1 167 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 F6UZH7 168 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 NDUFB4O95168 129 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 IGKV1-39P01597 117 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 IGKV1D-39P04432 117 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 CD177Q8N6Q3 437 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 GATAD1Q8WUU5 269 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 ABHD17AQ96GS6 310 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 J3QR06 171 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 OR4A8P0C604 315 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 COX7A1P24310 79 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 GLRXP35754 106 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 ZNF90Q03938 601 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 RTP5Q14D33 572 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 KLF2Q9Y5W3 355 aaPredicted RBP12.4□□□□□ -0.42
NEK9-209ENST00000556170 IGHV3-21A0A0B4J1V1 117 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 LINC00473A8K010 186 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 IGHV2-70P01814 119 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 PAX9P55771 341 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
NEK9-209ENST00000556170 PYY3Q5JQD4 70 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 Q6ZR03 302 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 SLC35E1Q96K37 410 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 NAT8Q9UHE5 227 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
NEK9-209ENST00000556170 RAB29O14966 203 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 RPLP1P05386 114 aaKnown RBP12.39□□□□□ -0.43
NEK9-209ENST00000556170 FAM3BP58499 235 aaPredicted RBP12.39□□□□□ -0.43
NEK9-209ENST00000556170 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 HES1Q14469 280 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 IQCJQ1A5X6 159 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 Q6ZSR3 168 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 HARBI1Q96MB7 349 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 LRRC10Q5BKY1 277 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 ACSM6Q6P461 480 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 C22orf15Q8WYQ4 148 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 SLC25A10Q9UBX3 287 aaPredicted RBP12.39□□□□□ -0.43
NEK9-209ENST00000556170 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 TOX4O94842 621 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 ZNF506Q5JVG8 444 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 MRPL37Q9BZE1 423 aaKnown RBP12.39□□□□□ -0.43
NEK9-209ENST00000556170 TCF19Q9Y242 345 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 SPTBN4Q9H254 2564 aa12.39□□□□□ -0.43
NEK9-209ENST00000556170 OPRK1P41145 380 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 PNRC1Q12796 327 aaPredicted RBP12.38□□□□□ -0.43
NEK9-209ENST00000556170 TOMM20LQ6UXN7 152 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 C16orf82Q7Z2V1 217 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 MOB3BQ86TA1 216 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 SMDT1Q9H4I9 107 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 PXMP4Q9Y6I8 212 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 ELOA3CA0A087WX78 387 aaPredicted RBP12.38□□□□□ -0.43
NEK9-209ENST00000556170 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
NEK9-209ENST00000556170 S100A7P31151 101 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 PRR27Q6MZM9 219 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 OR51G1Q8NGK1 321 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 CHD8Q9HCK8 2581 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 SIAH2O43255 324 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 CNIH1O95406 144 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 VAMP3Q15836 100 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
NEK9-209ENST00000556170 XKRY2A2RUG3 117 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 FAM90A26D6RGX4 464 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 IFNL4K9M1U5 179 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 THBS3P49746 956 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 PSG5Q15238 335 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 Q6ZS49 121 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 RPP25LQ8N5L8 163 aaKnown RBP12.37□□□□□ -0.43
NEK9-209ENST00000556170 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 GCSAMQ8N6F7 178 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 SLC24A4Q8NFF2 622 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 OR4C5Q8NGB2 326 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 Q8WTZ3 238 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 NPCDR1Q9BY65 106 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 PARLQ9H300 379 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 RALYQ9UKM9 306 aaKnown RBP12.37□□□□□ -0.43
NEK9-209ENST00000556170 OR51B2Q9Y5P1 312 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 OR10J4P0C629 311 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 SMIM15Q7Z3B0 74 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 IGKV3-15P01624 115 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 CD40P25942 277 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 ERVFC1-1P60608 527 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 ZNF474Q6S9Z5 364 aaPredicted RBP12.37□□□□□ -0.43
NEK9-209ENST00000556170 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
NEK9-209ENST00000556170 FUT9Q9Y231 359 aa12.37□□□□□ -0.43
NEK9-209ENST00000556170 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 PLA2G5P39877 138 aa12.36□□□□□ -0.43
NEK9-209ENST00000556170 MORN2Q502X0 79 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms