RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ABHD5Q8WTS1 349 aa11.17□□□□□ -0.62
SNX6-206ENST00000556162 TMEM230Q96A57 120 aa11.17□□□□□ -0.62
SNX6-206ENST00000556162 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
SNX6-206ENST00000556162 TSC22D3Q99576 134 aa11.17□□□□□ -0.62
SNX6-206ENST00000556162 GON7Q9BXV9 100 aa11.17□□□□□ -0.62
SNX6-206ENST00000556162 ZNF430Q9H8G1 570 aaPredicted RBP11.17□□□□□ -0.62
SNX6-206ENST00000556162 TBC1D24Q9ULP9 559 aa11.17□□□□□ -0.62
SNX6-206ENST00000556162 TENM1Q9UKZ4 2725 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 ATG12O94817 140 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 ANXA3P12429 323 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 UCP1P25874 307 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 G6PCP35575 357 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 STPG2Q8N412 459 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 GALNT14Q96FL9 552 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 TMEM140Q9NV12 185 aa11.16□□□□□ -0.62
SNX6-206ENST00000556162 FAM240BA0A1B0GVZ2 78 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 ATP6V0E1O15342 81 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 SLC6A1P30531 599 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 TNXAQ16473 311 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 ARPC1AQ92747 370 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 STAB1Q9NY15 2570 aa11.15□□□□□ -0.62
SNX6-206ENST00000556162 PSMB11A5LHX3 300 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 ARPC1BO15143 372 aaKnown RBP11.15□□□□□ -0.63
SNX6-206ENST00000556162 CDS2O95674 445 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 IGKV1-39P01597 117 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 IGKV1D-39P04432 117 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 TCRBP04435 133 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 VDAC1P21796 283 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 DEFA1P59665 94 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 DEFA3P59666 94 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 RPL8P62917 257 aaKnown RBP11.15□□□□□ -0.63
SNX6-206ENST00000556162 SLC35B1P78383 322 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 NDPQ00604 133 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 TMEM267Q0VDI3 215 aaPredicted RBP11.15□□□□□ -0.63
SNX6-206ENST00000556162 SLC25A42Q86VD7 318 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 CADM3Q8N126 398 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 GRPEL2Q8TAA5 225 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 SEC22AQ96IW7 307 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 ZNF747Q9BV97 191 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 ZNF580Q9UK33 172 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 FLVCR2Q9UPI3 526 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 WSB1Q9Y6I7 421 aa11.15□□□□□ -0.63
SNX6-206ENST00000556162 UPK2O00526 184 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
SNX6-206ENST00000556162 VAMP1P23763 118 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 MAS1LP35410 378 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 SUPT4H1P63272 117 aaKnown RBP11.14□□□□□ -0.63
SNX6-206ENST00000556162 H2BFWTQ7Z2G1 175 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 ZNF695Q8IW36 515 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 SGMS2Q8NHU3 365 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
SNX6-206ENST00000556162 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
SNX6-206ENST00000556162 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 SNAPC5O75971 98 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
SNX6-206ENST00000556162 HLA-GP17693 338 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 AKR1C2P52895 323 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 UBE2MP61081 183 aaKnown RBP11.13□□□□□ -0.63
SNX6-206ENST00000556162 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
SNX6-206ENST00000556162 TMEM187Q14656 261 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 RRNAD1Q96FB5 475 aaKnown RBP11.13□□□□□ -0.63
SNX6-206ENST00000556162 FBXO7Q9Y3I1 522 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 NUBP2Q9Y5Y2 271 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 DNHD1Q96M86 4753 aa11.13□□□□□ -0.63
SNX6-206ENST00000556162 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 G3V318 75 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 SRPXP78539 464 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 AKIRIN2Q53H80 203 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 LFNGQ8NES3 379 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 ENKURQ8TC29 256 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 WIPF2Q8TF74 440 aaPredicted RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 SRSF12Q8WXF0 261 aaKnown RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 RBPMSQ93062 196 aaKnown RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 TMEM56Q96MV1 263 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 PHB2Q99623 299 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 COMMD5Q9GZQ3 224 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 TMEM56-RWDD3S4R434 201 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 ANK2Q01484 3957 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 MSGN1A6NI15 193 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 FGF2P09038 288 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 CRIP2P52943 208 aaPredicted RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
SNX6-206ENST00000556162 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
SNX6-206ENST00000556162 PPP1R1AQ13522 171 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms