RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CTRB2Q6GPI1 263 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CLEC19AQ6UXS0 136 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 KCTD9Q7L273 389 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 GPHA2Q96T91 129 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ACOT13Q9NPJ3 140 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SLC2A9Q9NRM0 540 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SCN3BQ9NY72 215 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 OR2W1Q9Y3N9 320 aa10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 RBM7Q9Y580 266 aaKnown RBP10.7□□□□□ -0.7
CHMP4BP1-201ENST00000556017 IGLV11-55A0A075B6I3 123 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 MFSD2BA6NFX1 497 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 RGS10O43665 173 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 PSMD7P51665 324 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 AQP4P55087 323 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 MRPS15P82914 257 aaKnown RBP10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 PRSS48Q7RTY5 328 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 UXS1Q8NBZ7 420 aa10.69□□□□□ -0.7
CHMP4BP1-201ENST00000556017 HERC2O95714 4834 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SSX5O60225 188 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SCAF4O95104 1147 aaKnown RBP10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 GADD45AP24522 165 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 PSMB6P28072 239 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ARL3P36405 182 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 RPL27AP46776 148 aaKnown RBP10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TM4SF20Q53R12 229 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 FAM209BQ5JX69 171 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ZNF57Q68EA5 555 aaPredicted RBP10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SLC25A42Q86VD7 318 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 WFDC3Q8IUB2 231 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 FYTTD1Q96QD9 318 aaKnown RBP10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 OR2A7Q96R45 310 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TPRKBQ9Y3C4 175 aa10.68□□□□□ -0.7
CHMP4BP1-201ENST00000556017 DNAH6Q9C0G6 4158 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CREBL2O60519 120 aaPredicted RBP10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ACTL6BO94805 426 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 REG1AP05451 166 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ARFRP1Q13795 201 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CDNFQ49AH0 187 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ZNF773Q6PK81 442 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 BTNL8Q6UX41 500 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 NUDCD2Q8WVJ2 157 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 DCUN1D5Q9BTE7 237 aa10.67□□□□□ -0.7
CHMP4BP1-201ENST00000556017 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 A0A0J9YWU9 116 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 MAS1LP35410 378 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TBCEQ15813 527 aaPredicted RBP10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 HACD4Q5VWC8 232 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SLC16A13Q7RTY0 426 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 MFSD4AQ8N468 514 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 OR52B4Q8NGK2 314 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ST6GALNAC5Q9BVH7 336 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 NDUFB11Q9NX14 153 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SPATA2Q9UM82 520 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 PRELID3BQ9Y3B1 194 aa10.66□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TRAV3A0A0B4J244 114 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TRDV1A0A1B0GX56 115 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 IGLC7A0M8Q6 106 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 SMIM30A4D0T7 59 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ANKRD65E5RJM6 399 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 S1PR2O95136 353 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CLEC3BP05452 202 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 RAB3BP20337 219 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TALDO1P37837 337 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CNIH2Q6PI25 160 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 OR4S2Q8NH73 311 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ZNF502Q8TBZ5 544 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 HSD17B10Q99714 261 aaKnown RBP10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 CENPOQ9BU64 300 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ATG5Q9H1Y0 275 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 TAS2R8Q9NYW2 309 aa10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 MRPS7Q9Y2R9 242 aaKnown RBP10.65□□□□□ -0.7
CHMP4BP1-201ENST00000556017 ZNF320A2RRD8 509 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 METTL21EPA6NDL7 271 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 TMEM235A6NFC5 223 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 PDCD5O14737 125 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 SLC22A5O76082 557 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 LY6G6CO95867 125 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 CTXN2P0C2S0 81 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 PTHLHP12272 177 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 CD36P16671 472 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 OR2B8PP59922 312 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 RPL8P62917 257 aaKnown RBP10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 PMS2P11Q13670 270 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 ODF3L2Q3SX64 289 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 TIMM50Q3ZCQ8 353 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 FAM106AQ4KMX7 169 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 OR4A47Q6IF82 309 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 VSTM2AQ8TAG5 236 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 EEF1AKMT3Q96AZ1 226 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 ZNF436Q9C0F3 470 aaPredicted RBP10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 CCDC90BQ9GZT6 254 aa10.64□□□□□ -0.71
CHMP4BP1-201ENST00000556017 DCSTAMPQ9H295 470 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms