RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FGF16O43320 207 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 ADAP1O75689 374 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 CNIH1O95406 144 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 LY86O95711 162 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 IFNA17P01571 189 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 GIPP09681 153 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-220ENST00000555634 FAM157CP0CG43 387 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 CD24P25063 80 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 BCAP31P51572 246 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 F2RL1P55085 397 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 LINC00205P59089 165 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 RPL8P62917 257 aaKnown RBP8.98□□□□□ -0.97
SHMT2-220ENST00000555634 EBI3Q14213 229 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 PSG5Q15238 335 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 LY6EQ16553 131 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 PPP1R27Q86WC6 154 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 VKORC1L1Q8N0U8 176 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 LHFPL5Q8TAF8 219 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 ABHD5Q8WTS1 349 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 C2orf50Q96LR7 162 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 RBM14Q96PK6 669 aaKnown RBP8.98□□□□□ -0.97
SHMT2-220ENST00000555634 ZNF436Q9C0F3 470 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-220ENST00000555634 GSKIPQ9P0R6 139 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 CSMD1Q96PZ7 3565 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 C15orf61A6NNL5 157 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 INAFM1C9JVW0 142 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 FAM90A26D6RGX4 464 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 HOXA3O43365 443 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-220ENST00000555634 KCNAB3O43448 404 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 PFDN1O60925 122 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 IGKV1-5P01602 117 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 IGHV4-59P01825 116 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 RLN2P04090 185 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 HLA-GP17693 338 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 PAX6P26367 422 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 IER3P46695 156 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 HOXA1P49639 335 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-220ENST00000555634 OR2B8PP59922 312 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 S100A10P60903 97 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 RAP2BP61225 183 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 GNB1P62873 340 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 FCN2Q15485 313 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 TNXAQ16473 311 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 C5orf64Q2M2E5 130 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 NMSQ5H8A3 153 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 FOXRED2Q8IWF2 684 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 BCL6BQ8N143 479 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-220ENST00000555634 SIGLECL1Q8N7X8 197 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 NPBQ8NG41 125 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 OR5B3Q8NH48 314 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 TMEM167AQ8TBQ9 72 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 CHIAQ9BZP6 476 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 NMES1Q9C002 83 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 NPFFR1Q9GZQ6 430 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 ZNF257Q9Y2Q1 563 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 CELSR1Q9NYQ6 3014 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
SHMT2-220ENST00000555634 ACANP16112 2415 aa8.96□□□□□ -0.97
SHMT2-220ENST00000555634 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.97
SHMT2-220ENST00000555634 L7N2F9 121 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 UPK2O00526 184 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 CYB5BO43169 146 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 ST8SIA3O43173 380 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 CCNKO75909 580 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 NDUFA3O95167 84 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 IGKV1-39P01597 117 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 IGKV1D-39P04432 117 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 CRYBA1P05813 215 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 NKX2-1P43699 371 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 RPL15P61313 204 aaKnown RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 VAMP2P63027 116 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 RPP30P78346 268 aaKnown RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 Q71RC1 249 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 HSD17B13Q7Z5P4 300 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 ZNF429Q86V71 674 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 TMEM219Q86XT9 240 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 PUSL1Q8N0Z8 303 aaKnown RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 Q8N6K4 173 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 ZBTB8BQ8NAP8 495 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 AJUBAQ96IF1 538 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 CIB3Q96Q77 187 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 FBXL15Q9H469 300 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 PLEKHA3Q9HB20 300 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 TNFRSF19Q9NS68 423 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 FOXA2Q9Y261 457 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-220ENST00000555634 SIGLEC9Q9Y336 463 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 OR51B2Q9Y5P1 312 aa8.96□□□□□ -0.98
SHMT2-220ENST00000555634 A0A1W2PN81 502 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 A6NDX4 124 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 DNAJC9-AS1A6NH13 148 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 CEBPZOSA8MTT3 80 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 SCAF4O95104 1147 aaKnown RBP8.95□□□□□ -0.98
SHMT2-220ENST00000555634 HLA-DRB1P01911 266 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 CHRNA7P36544 502 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-220ENST00000555634 RPL27AP46776 148 aaKnown RBP8.95□□□□□ -0.98
SHMT2-220ENST00000555634 BRWD1-AS2P59051 145 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 CD83Q01151 205 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 PRSS8Q16651 343 aa8.95□□□□□ -0.98
SHMT2-220ENST00000555634 OR11H7Q8NGC8 314 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms