RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MMD2Q8IY49 270 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 C16orf95Q9H693 158 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 TMEM140Q9NV12 185 aa13.04□□□□□ -0.32
SPTLC2-203ENST00000554901 A0A0B4J2A0 478 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 DHFRP00374 187 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 IGHG2P01859 326 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 MAS1LP35410 378 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 G6PCP35575 357 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 AKR1C2P52895 323 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 RIPPLY3P57055 190 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 PRSS8Q16651 343 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 TMEM268Q5VZI3 342 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 Q6ZSV7 163 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 SSX9Q7RTT3 188 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 H2BFWTQ7Z2G1 175 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 SELENOHQ8IZQ5 122 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 VKORC1L1Q8N0U8 176 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 OR4F5Q8NH21 305 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 COQ8AQ8NI60 647 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 RRNAD1Q96FB5 475 aaKnown RBP13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 ZNF702PQ9H963 129 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 SHPKQ9UHJ6 478 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 MMP24Q9Y5R2 645 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 HKR1P10072 659 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 VDAC1P21796 283 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 MINDY2Q8NBR6 621 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 OR2T6Q8NHC8 308 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 MITD1Q8WV92 249 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 GPN1Q9HCN4 374 aaPredicted RBP13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 ZNF580Q9UK33 172 aa13.03□□□□□ -0.32
SPTLC2-203ENST00000554901 A0A1B0GUS0 222 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 UPK2O00526 184 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 ACTL6BO94805 426 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 P0C879 139 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 RPL8P62917 257 aaKnown RBP13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 RELBQ01201 579 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 SLC35G3Q8N808 338 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 CASTOR1Q8WTX7 329 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 PHB2Q99623 299 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 ZNF430Q9H8G1 570 aaPredicted RBP13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 TPSG1Q9NRR2 321 aa13.02□□□□□ -0.33
SPTLC2-203ENST00000554901 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 SNRPGP15A8MWD9 76 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 FCN1O00602 326 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 SNAPC5O75971 98 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 CA2P00918 260 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 IGKV1-5P01602 117 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 CX3CL1P78423 397 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 OXA1LQ15070 435 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 MRGPRG-AS1Q2M3A8 158 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 ANKRD55Q3KP44 614 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 C9orf152Q5JTZ5 239 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 SLC35E3Q7Z769 313 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 RNASE11Q8TAA1 199 aaKnown RBP13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 OR51J1Q9H342 316 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 BEX1Q9HBH7 125 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 FKBP11Q9NYL4 201 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 PRNDQ9UKY0 176 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
SPTLC2-203ENST00000554901 AP4M1O00189 453 aa13□□□□□ -0.33
SPTLC2-203ENST00000554901 IGF1P05019 195 aa13□□□□□ -0.33
SPTLC2-203ENST00000554901 SPNP16150 400 aa13□□□□□ -0.33
SPTLC2-203ENST00000554901 SRSF2Q01130 221 aaKnown RBP13□□□□□ -0.33
SPTLC2-203ENST00000554901 FOXRED2Q8IWF2 684 aa13□□□□□ -0.33
SPTLC2-203ENST00000554901 HSPB9Q9BQS6 159 aa13□□□□□ -0.33
SPTLC2-203ENST00000554901 CACFD1Q9UGQ2 172 aa13□□□□□ -0.33
SPTLC2-203ENST00000554901 HLA-GP17693 338 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 COMPP49747 757 aaPredicted RBP12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 CRIP2P52943 208 aaPredicted RBP12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 FOXL1Q12952 345 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 ARSJQ5FYB0 599 aaPredicted RBP12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 NMSQ5H8A3 153 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 LYZL2Q7Z4W2 148 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 CHPT1Q8WUD6 406 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 ARPC1AQ92747 370 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 PRR13Q9NZ81 148 aa12.99□□□□□ -0.33
SPTLC2-203ENST00000554901 SH2D7A6NKC9 451 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 C15orf61A6NNL5 157 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 CNIH1O95406 144 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SLC25A6P12236 298 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 VDAC2P45880 294 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 SSBP2P81877 361 aaPredicted RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 FXYD3Q14802 87 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TNXAQ16473 311 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 KRTAP24-1Q3LI83 254 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 THOC7Q6I9Y2 204 aaKnown RBP12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 Q6ZS46 218 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 OR52B4Q8NGK2 314 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 OR5B3Q8NH48 314 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 OR4A16Q8NH70 328 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 LINC01006Q8NI28 216 aa12.98□□□□□ -0.33
SPTLC2-203ENST00000554901 TMEM68Q96MH6 324 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms