RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 MRPL41Q8IXM3 137 aaKnown RBP6.4□□□□□ -1.38
LINC01397-201ENST00000554808 PUSL1Q8N0Z8 303 aaKnown RBP6.4□□□□□ -1.38
LINC01397-201ENST00000554808 LGI3Q8N145 548 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 COMMD1Q8N668 190 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 LRTM2Q8N967 370 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 MINDY2Q8NBR6 621 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 COQ8AQ8NI60 647 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 RNASE11Q8TAA1 199 aaKnown RBP6.4□□□□□ -1.38
LINC01397-201ENST00000554808 TMEM167AQ8TBQ9 72 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 GLYATL2Q8WU03 294 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 CHPT1Q8WUD6 406 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 TMEM230Q96A57 120 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 SEC22AQ96IW7 307 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 TMEM56Q96MV1 263 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 TP53RKQ96S44 253 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 GPN1Q9HCN4 374 aaPredicted RBP6.4□□□□□ -1.38
LINC01397-201ENST00000554808 SHPKQ9UHJ6 478 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 TMEM56-RWDD3S4R434 201 aa6.4□□□□□ -1.38
LINC01397-201ENST00000554808 TMEM89A2RUT3 159 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 CLPSL1A2RUU4 121 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 SFT2D2O95562 160 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 DUS4LO95620 317 aaKnown RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 DHFRP00374 187 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 AMY1AP04745 511 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 IGF1P05019 195 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 CRYGBP07316 175 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 H2AFB2P0C5Z0 115 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 VDAC1P21796 283 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 CNTFRP26992 372 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 COMPP49747 757 aaPredicted RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 RPL8P62917 257 aaKnown RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 SUPT4H1P63272 117 aaKnown RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 SLC35B1P78383 322 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 TMEM187Q14656 261 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 C4orf46Q504U0 113 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 C9orf152Q5JTZ5 239 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 OR4A47Q6IF82 309 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 HSD17B13Q7Z5P4 300 aaPredicted RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 ADAD2Q8NCV1 583 aaKnown RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 LSM10Q969L4 123 aaKnown RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 GPHA2Q96T91 129 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 PHB2Q99623 299 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 SPIN2AQ99865 258 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 SPIN2BQ9BPZ2 258 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 SRSF8Q9BRL6 282 aaKnown RBP6.39□□□□□ -1.39
LINC01397-201ENST00000554808 COMMD5Q9GZQ3 224 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 OR51J1Q9H342 316 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 FBXL15Q9H469 300 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 ZNF702PQ9H963 129 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 PRNDQ9UKY0 176 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 TMED3Q9Y3Q3 217 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 RNF114Q9Y508 228 aa6.39□□□□□ -1.39
LINC01397-201ENST00000554808 TRAV6A0A075B6T7 132 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 IGHV7-81A0A0B4J1V7 117 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 C9orf170A2RU37 121 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 SRRM4A7MD48 611 aaKnown RBP6.38□□□□□ -1.39
LINC01397-201ENST00000554808 CNIH1O95406 144 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 CA2P00918 260 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 KRASP01116 189 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 IL5P05113 134 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 IL6RP08887 468 aaPredicted RBP6.38□□□□□ -1.39
LINC01397-201ENST00000554808 VSIG10L2P0DP72 767 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 SLC25A6P12236 298 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 G6PCP35575 357 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 BLCAPP62952 87 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 DHRS2Q13268 280 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 PPP1R1AQ13522 171 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 TNXAQ16473 311 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 PRSS8Q16651 343 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 RGS21Q2M5E4 152 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 KRTAP24-1Q3LI83 254 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 TMEM268Q5VZI3 342 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 SSX9Q7RTT3 188 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 NRARPQ7Z6K4 114 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 ZNF429Q86V71 674 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
LINC01397-201ENST00000554808 OR5B3Q8NH48 314 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 OR4A16Q8NH70 328 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 SGMS2Q8NHU3 365 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 LINC01006Q8NI28 216 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 ARPC1AQ92747 370 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 MARVELD1Q9BSK0 173 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 PDCD10Q9BUL8 212 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 C19orf24Q9BVV8 132 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 COA4Q9NYJ1 87 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 ZNF257Q9Y2Q1 563 aa6.38□□□□□ -1.39
LINC01397-201ENST00000554808 C15orf61A6NNL5 157 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 SNRPGP15A8MWD9 76 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 INMT-MINDY4F8WBC2 141 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 H3BUA1 57 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 UPK2O00526 184 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 CYB5BO43169 146 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
LINC01397-201ENST00000554808 IFNA21P01568 189 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 IGKV1-39P01597 117 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 IGKV1D-39P04432 117 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 HLA-GP17693 338 aa6.37□□□□□ -1.39
LINC01397-201ENST00000554808 ANXA7P20073 488 aaKnown RBP6.37□□□□□ -1.39
LINC01397-201ENST00000554808 RPL27AP46776 148 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms