RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MIA2Q96PC5 1412 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ARID1AO14497 2285 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 IGHV3OR15-7A0A075B7D8 119 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 IGSF23A1L1A6 192 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 GGT3PA6NGU5 568 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 C1orf196B1AJZ1 125 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 PANO1I0J062 215 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 AIPO00170 330 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 TXNDC9O14530 226 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ARPC5O15511 151 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 SH2D1AO60880 128 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 IFNA7P01567 189 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 NBEAP1P0C6P0 100 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 CGB3P0DN86 165 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 CGB7P0DN87 165 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 SLC25A16P16260 332 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 SPI1P17947 270 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 OPRM1P35372 400 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 MPV17P39210 176 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 CSN1S1P47710 185 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ATP5G3P48201 142 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ZNF140P52738 457 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 TBPL1P62380 186 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 FUT5Q11128 374 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 SURF2Q15527 256 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 CST6Q15828 149 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 CCDC153Q494R4 210 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 C10orf91Q5T1B1 145 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 IBA57Q5T440 356 aaKnown RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 C9orf64Q5T6V5 341 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 RASL11AQ6T310 242 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 UNQ9165/PRO28630Q6UXU0 137 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 Q6ZS49 121 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 DHFR2Q86XF0 187 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 PHF13Q86YI8 300 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 GPHB5Q86YW7 130 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ZNF709Q8N972 641 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ZNF721Q8TF20 911 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 RTN4IP1Q8WWV3 396 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 DNAJC9Q8WXX5 260 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 BORCS5Q969J3 196 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 RMND5BQ96G75 393 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 IGF2BP2-AS1Q96M15 143 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 FOPNLQ96NB1 174 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 B9D2Q9BPU9 175 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 SEC22CQ9BRL7 303 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ZNF2Q9BSG1 426 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 EFCAB11Q9BUY7 163 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 CCDC32Q9BV29 185 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 C1QTNF6Q9BXI9 259 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 NKX6-2Q9C056 277 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 C6orf62Q9GZU0 229 aaPredicted RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 EFCAB1Q9HAE3 211 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 TMEM138Q9NPI0 162 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 ACER3Q9NUN7 267 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 GSKIPQ9P0R6 139 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 TAAR3PQ9P1P4 343 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 MCTS1Q9ULC4 181 aaKnown RBP1.41□□□□□ -2.18
SRP54-204ENST00000553923 RFNGQ9Y644 331 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 U3KQK5 164 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 NUP155O75694 1391 aa1.41□□□□□ -2.18
SRP54-204ENST00000553923 RAI1Q7Z5J4 1906 aaPredicted RBP1.4□□□□□ -2.18
SRP54-204ENST00000553923 TMEM131Q92545 1883 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SYNMO15061 1565 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ROBO3Q96MS0 1386 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 TRBV24-1A0A075B6N3 115 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 RIIAD1A6NNX1 92 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 A8MWP6 167 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 C9JCJ5 164 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 E7EQ34 232 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ORC5O43913 435 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ZNF324O75467 553 aaPredicted RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 PIAS1O75925 651 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ZNF682O95780 498 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 APOA2P02652 100 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 IGLV7-43P04211 117 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SRP19P09132 144 aaKnown RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 OR10J4P0C629 311 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ZNF286BP0CG31 522 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 CRYBB3P26998 211 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 GABRA2P47869 451 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 KLF3P57682 345 aaPredicted RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 TSPEAR-AS2P59090 65 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 FGF12P61328 243 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 FLI1Q01543 452 aaPredicted RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 OR8G1Q15617 311 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 MRPL51Q4U2R6 128 aaKnown RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 CCDC58Q4VC31 144 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 LINC00483Q53H64 154 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 LDLRAD2Q5SZI1 272 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 LYRM7Q5U5X0 104 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SLC25A34Q6PIV7 304 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SSX8Q7RTT4 187 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SPATA12Q7Z6I5 190 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 BPIFA4PQ86YQ2 179 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ZNF695Q8IW36 515 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 H1FOOQ8IZA3 346 aaPredicted RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 OSR2Q8N2R0 312 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 EXOC3-AS1Q8N2X6 119 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 ZNF283Q8N7M2 679 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms