RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FAM172AQ8WUF8 416 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 CYGBQ8WWM9 190 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 RMND5BQ96G75 393 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 PPP1R36Q96LQ0 422 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 DERL3Q96Q80 235 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 HBEGFQ99075 208 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 TMEM208Q9BTX3 173 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 THTPAQ9BU02 230 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF426Q9BUY5 554 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 UGT2B28Q9BY64 529 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 DHX35Q9H5Z1 703 aaKnown RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 IMP3Q9NV31 184 aaKnown RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 FGFR1OP2Q9NVK5 253 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 EURLQ9NYK6 297 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 RWDD2AQ9UIY3 292 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 POMPQ9Y244 141 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 V9GYY5 206 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 CCDC88CQ9P219 2028 aa1.84□□□□□ -2.12
SCFD1-210ENST00000553693 ABCA4P78363 2273 aa1.84□□□□□ -2.12
SCFD1-210ENST00000553693 CUBNO60494 3623 aa1.84□□□□□ -2.12
SCFD1-210ENST00000553693 CACNA1CQ13936 2221 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 TGP01266 2768 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 FAM183AA6NL82 134 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 LEUTXA8MZ59 168 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 CCRL2O00421 344 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 OR7C2O60412 319 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 HPGDSO60760 199 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 PDCD6O75340 191 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 POP7O75817 140 aaKnown RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 OR2B3O76000 313 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 SERPINA7P05543 415 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 SEC11BP0C7V7 166 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 CD28P10747 220 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 SPTBP11277 2137 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 CFL1P23528 166 aaKnown RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 TSPOP30536 169 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 SDC4P31431 198 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 PSMD7P51665 324 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 TPI1P60174 286 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 MAGOHP61326 146 aaKnown RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 MEF2BQ02080 365 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 FUT5Q11128 374 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 PAFAH1B3Q15102 231 aaKnown RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 OGFRL1Q5TC84 451 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 WDR59Q6PJI9 974 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 TRAPPC5Q8IUR0 188 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 TMEM251Q8N6I4 163 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 GATD1Q8NB37 220 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 TMEM35BQ8NCS4 154 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 OR52N1Q8NH53 320 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 STOML3Q8TAV4 291 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 CIRBP-AS1Q8TBR5 109 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 FAM57AQ8TBR7 257 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 NAT14Q8WUY8 206 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 YIPF5Q969M3 257 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 SPACA5Q96QH8 159 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 LINC01587Q99440 93 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 RNF5Q99942 180 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF717Q9BY31 904 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 PLEKHF2Q9H8W4 249 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 WDR54Q9H977 334 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 FAM206AQ9NX38 181 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 GLS2Q9UI32 602 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 DNAJC12Q9UKB3 198 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 KLF13Q9Y2Y9 288 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 POLR3HQ9Y535 204 aaPredicted RBP1.83□□□□□ -2.12
SCFD1-210ENST00000553693 DOCK10Q96BY6 2186 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 PKD1L1Q8TDX9 2849 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 AKAP6Q13023 2319 aa1.83□□□□□ -2.12
SCFD1-210ENST00000553693 NUP210LQ5VU65 1888 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 ANK2Q01484 3957 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 IGKV3D-11A0A0A0MRZ8 115 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 IGHV1-45A0A0A0MS14 117 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 GMNCA6NCL1 334 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 SIGLEC16A6NMB1 481 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 C2orf74A8MZ97 194 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 LGALS9O00182 355 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 ATP8B1O43520 1251 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 CDRT1O95170 752 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 IGLV2-8P01709 118 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 HLA-AP01891 365 aaKnown RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 GUSBP08236 651 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 PIRTP0C851 137 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 COX6A1P12074 109 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 HIST1H1CP16403 213 aaKnown RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 UGT2B7P16662 529 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 S100A2P29034 98 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 HSPA9P38646 679 aaKnown RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 SULT1A2P50226 295 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 CMC4P56277 68 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 BIKQ13323 160 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 TMEM241Q24JQ0 296 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 SP6Q3SY56 376 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 FAM222AQ5U5X8 452 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 MORN3Q6PF18 240 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 CASP12Q6UXS9 341 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 UNQ9165/PRO28630Q6UXU0 137 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 APCDD1LQ8NCL9 501 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 OR5L1Q8NGL2 311 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms