RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ZNF695Q8IW36 515 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 SRSF12Q8WXF0 261 aaKnown RBP17.81■□□□□ 0.44
TDP1-206ENST00000553569 SLC2A9Q9NRM0 540 aa17.81■□□□□ 0.44
TDP1-206ENST00000553569 RPA2P15927 270 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 NQO2P16083 231 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 SPANXN2Q5MJ10 180 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 OR4A47Q6IF82 309 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 OR6Q1Q8NGQ2 317 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 TERB2Q8NHR7 220 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 TMEM167AQ8TBQ9 72 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 THAP7Q9BT49 309 aaPredicted RBP17.8■□□□□ 0.44
TDP1-206ENST00000553569 PLEKHA2Q9HB19 425 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 HRASLSQ9HDD0 168 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 COMMD9Q9P000 198 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 MGAM2Q2M2H8 2515 aa17.8■□□□□ 0.44
TDP1-206ENST00000553569 VWFP04275 2813 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 FBN3Q75N90 2809 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 MSGN1A6NI15 193 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 LPAR6P43657 344 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 Q8N402 240 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 DMBX1Q8NFW5 382 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 OR5T1Q8NG75 326 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 OR5M8Q8NGP6 311 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 OR13C8Q8NGS7 320 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 MARCH1Q8TCQ1 289 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 MS4A10Q96PG2 267 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 AIFM2Q9BRQ8 373 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 ZNF355PQ9NSJ1 428 aa17.79■□□□□ 0.44
TDP1-206ENST00000553569 MPPED1O15442 326 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 CDX1P47902 265 aaPredicted RBP17.78■□□□□ 0.44
TDP1-206ENST00000553569 RAB9AP51151 201 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 PIGPP57054 158 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 ERVK-16P61578 105 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 DEFB136Q30KP8 78 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 ASPHD1Q5U4P2 390 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 ETV3LQ6ZN32 361 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 MYOZ3Q8TDC0 251 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 TRIM63Q969Q1 353 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 ZNF486Q96H40 463 aaPredicted RBP17.78■□□□□ 0.44
TDP1-206ENST00000553569 DUX3Q96PT4 197 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 TMEM140Q9NV12 185 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 MCUBQ9NWR8 336 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 BET1LQ9NYM9 111 aa17.78■□□□□ 0.44
TDP1-206ENST00000553569 PKD1L1Q8TDX9 2849 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 PTBP1P26599 531 aaKnown RBP eCLIP17.77■□□□□ 0.44
TDP1-206ENST00000553569 POU2AF1Q16633 256 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 ZNF585BQ52M93 769 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 ZNF491Q8N8L2 437 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 OR51S1Q8NGJ8 323 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 ZFAND1Q8TCF1 268 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 MRGPRFQ96AM1 343 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 OR5B12Q96R08 314 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 GNB4Q9HAV0 340 aa17.77■□□□□ 0.44
TDP1-206ENST00000553569 MARCH11A6NNE9 402 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 CD40LGP29965 261 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 SLC6A1P30531 599 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 RPL27AP46776 148 aaKnown RBP17.76■□□□□ 0.43
TDP1-206ENST00000553569 TPPP2P59282 170 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 RND3P61587 244 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 RPL8P62917 257 aaKnown RBP17.76■□□□□ 0.43
TDP1-206ENST00000553569 KIAA0141Q14154 515 aaPredicted RBP17.76■□□□□ 0.43
TDP1-206ENST00000553569 OR4A5Q8NH83 315 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 C4orf3Q8WVX3 66 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 PRRT1Q99946 306 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 COPZ2Q9P299 210 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 VSIG4Q9Y279 399 aa17.76■□□□□ 0.43
TDP1-206ENST00000553569 TRAV3A0A0B4J244 114 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 KRASP01116 189 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 MYOD1P15172 320 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 CD33P20138 364 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 G6PCP35575 357 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 ETV6P41212 452 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 ECI1P42126 302 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 CCDC71LQ8N9Z2 235 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 RAX2Q96IS3 184 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 UBE2E2Q96LR5 201 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 TMEM68Q96MH6 324 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 FYTTD1Q96QD9 318 aaKnown RBP17.75■□□□□ 0.43
TDP1-206ENST00000553569 SPIN2AQ99865 258 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 SPIN2BQ9BPZ2 258 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 SRRQ9GZT4 340 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 COA4Q9NYJ1 87 aa17.75■□□□□ 0.43
TDP1-206ENST00000553569 C14orf166Q9Y224 244 aaKnown RBP17.75■□□□□ 0.43
TDP1-206ENST00000553569 CMYA5Q8N3K9 4069 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 NBEAL1Q6ZS30 2694 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 UPK2O00526 184 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 TRGV3P03979 118 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 CTSDP07339 412 aaPredicted RBP17.74■□□□□ 0.43
TDP1-206ENST00000553569 HLA-GP17693 338 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 MAS1LP35410 378 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 AP3S2P59780 193 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 KLF9Q13886 244 aaPredicted RBP17.74■□□□□ 0.43
TDP1-206ENST00000553569 TOMM5Q8N4H5 51 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 SCP2D1Q9UJQ7 156 aa17.74■□□□□ 0.43
TDP1-206ENST00000553569 HMX3A6NHT5 357 aa17.73■□□□□ 0.43
TDP1-206ENST00000553569 CCL24O00175 119 aa17.73■□□□□ 0.43
TDP1-206ENST00000553569 FAUP35544 74 aaKnown RBP17.73■□□□□ 0.43
TDP1-206ENST00000553569 MYCNOSP40205 109 aa17.73■□□□□ 0.43
TDP1-206ENST00000553569 RAB25P57735 213 aa17.73■□□□□ 0.43
TDP1-206ENST00000553569 C1QL4Q86Z23 238 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms