RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MRPS7Q9Y2R9 242 aaKnown RBP13.9□□□□□ -0.18
SHMT2-206ENST00000553529 A0A0A6YYH2 397 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 A6NJ64 397 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 HPGDSO60760 199 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 OR2A4O95047 310 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 S1PR2O95136 353 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 HLA-DMAP28067 261 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 INSL3P51460 131 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 ADAMTSL5Q6ZMM2 481 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 ZNF66Q6ZN08 573 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 LYSMD2Q8IV50 215 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 MMD2Q8IY49 270 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 TMEM167AQ8TBQ9 72 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 S100A16Q96FQ6 103 aaKnown RBP13.89□□□□□ -0.19
SHMT2-206ENST00000553529 OR2A7Q96R45 310 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 DMRT1Q9Y5R6 373 aa13.89□□□□□ -0.19
SHMT2-206ENST00000553529 TRBV9A0A0B4J1U6 114 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 NDUFB8O95169 186 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 IGLV1-51P01701 117 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 RLN1P04808 185 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 CSN3P07498 182 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 ELK1P19419 428 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 GNRHRP30968 328 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 RPL27AP46776 148 aaKnown RBP13.88□□□□□ -0.19
SHMT2-206ENST00000553529 SNX29P2Q8IUI4 249 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 TTC9CQ8N5M4 171 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 OR9G4Q8NGQ1 327 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 OR4C12Q96R67 309 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 ZNF2Q9BSG1 426 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-206ENST00000553529 ZC4H2Q9NQZ6 224 aa13.88□□□□□ -0.19
SHMT2-206ENST00000553529 KMT2CQ8NEZ4 4911 aaKnown RBP13.88□□□□□ -0.19
SHMT2-206ENST00000553529 A0A0G2JLM5 398 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 FRMD6-AS1P0C7T7 363 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 AADACL3Q5VUY0 350 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 Q8N1Y9 231 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 GIMAP1Q8WWP7 306 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 CCDC140Q96MF4 163 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 TMEM68Q96MH6 324 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 FANCD2OSQ96PS1 177 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 VCX3AQ9NNX9 186 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 SMAD5-AS1Q9Y6J3 95 aa13.87□□□□□ -0.19
SHMT2-206ENST00000553529 SLC22A5O76082 557 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 ACTL6BO94805 426 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 BRI3O95415 125 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 ZNF735P0CB33 412 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 HRH1P35367 487 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 CTF1Q16619 201 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 C15orf32Q32M92 178 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 OR6Q1Q8NGQ2 317 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 HRASLSQ9HDD0 168 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 U3KQK5 164 aa13.86□□□□□ -0.19
SHMT2-206ENST00000553529 NAT1P18440 290 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 ZP3P21754 424 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 HERV-K104P61576 105 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 ATP5G2Q06055 141 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 RPEL1Q2QD12 228 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 CROCCP3Q8IVE0 287 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 OR10W1Q8NGF6 305 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 GPX8Q8TED1 209 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 CACNG8Q8WXS5 425 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 MOB3AQ96BX8 217 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 USMG5Q96IX5 58 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 SPIN2AQ99865 258 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 SPIN2BQ9BPZ2 258 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 FBXL7Q9UJT9 491 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 NSG2Q9Y328 171 aa13.85□□□□□ -0.19
SHMT2-206ENST00000553529 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.84□□□□□ -0.19
SHMT2-206ENST00000553529 MFSD2BA6NFX1 497 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 PGLYRP1O75594 196 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-206ENST00000553529 HLA-GP17693 338 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 PRSS3P35030 304 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 CBX5P45973 191 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 OR2B8PP59922 312 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 RPL8P62917 257 aaKnown RBP13.84□□□□□ -0.19
SHMT2-206ENST00000553529 PHLDA2Q53GA4 152 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 GPR107Q5VW38 600 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 ANKRD13BQ86YJ7 626 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 OR5H2Q8NGV7 314 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 SLC2A9Q9NRM0 540 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 ZMAT5Q9UDW3 170 aaKnown RBP13.84□□□□□ -0.19
SHMT2-206ENST00000553529 SORL1Q92673 2214 aa13.84□□□□□ -0.19
SHMT2-206ENST00000553529 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 DBX1A6NMT0 343 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 M0QYG6 137 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 UPK2O00526 184 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 OR2C1O95371 312 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 PSMB6P28072 239 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 ZNF585BQ52M93 769 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 DHRS11Q6UWP2 260 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 ELOVL1Q9BW60 279 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 BET1LQ9NYM9 111 aa13.83□□□□□ -0.2
SHMT2-206ENST00000553529 IGLC7A0M8Q6 106 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 NPIPB5A8MRT5 1133 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 GABARAPO95166 117 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 HRASP01112 189 aa13.82□□□□□ -0.2
SHMT2-206ENST00000553529 IGHV4-30-4P0DP06 118 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms