RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SSX1Q16384 188 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 DEFB135Q30KP9 77 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 OR2C3Q8N628 320 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 ZNF645Q8N7E2 425 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 OR2A7Q96R45 310 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 KCNK7Q9Y2U2 307 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 LSM2Q9Y333 95 aaKnown RBP10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 TMEM272A0A1B0GTI8 110 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 SLC22A5O76082 557 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 DEFA4P12838 97 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 GNB3P16520 340 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 GALP22466 123 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 PSMA1P25786 263 aaKnown RBP10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 CALRP27797 417 aaKnown RBP10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 PSMB6P28072 239 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 ARFRP1Q13795 201 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 OR2B11Q5JQS5 317 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 Q6ZS49 121 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 C19orf35Q6ZS72 473 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 STPG3Q8N7X2 389 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 OR10R2Q8NGX6 335 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 UFC1Q9Y3C8 167 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 S4R3C0 116 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 V9GY05 133 aa10.56□□□□□ -0.72
CHMP1A-210ENST00000551981 KIR2DL5BA0A0G2JN68 375 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 KIR2DL5BA0A0G2JPC4 375 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 PTGES3LE9PB15 166 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 MFNGO00587 321 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 CRYGCP07315 174 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 ZNF735P0CB33 412 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 MYOD1P15172 320 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 HIST1H1DP16402 221 aaKnown RBP10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 HES5Q5TA89 166 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 TMEM91Q6ZNR0 172 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 VKORC1L1Q8N0U8 176 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 KIR2DL5AQ8N109 375 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 KIR2DL5BQ8NHK3 375 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 CXorf58Q96LI9 332 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 FANCD2OSQ96PS1 177 aa10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
CHMP1A-210ENST00000551981 J3QRK9 145 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 DEDDO75618 318 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 CLEC3BP05452 202 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 HSMCR30P0CW71 290 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 AREGP15514 252 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 ELLP55199 621 aaPredicted RBP10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 RPS25P62851 125 aaKnown RBP10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 PLA2G7Q13093 441 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 KLK9Q2XQG4 91 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 RNF183Q96D59 192 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 C5orf66Q9H5L9 145 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 KLK9Q9UKQ9 250 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 OR2W1Q9Y3N9 320 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 KIAA1109Q2LD37 5005 aa10.54□□□□□ -0.72
CHMP1A-210ENST00000551981 RYR1P21817 5038 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 METTL21EPA6NDL7 271 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 CTXN2P0C2S0 81 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 CTRB1P17538 263 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 CRHBPP24387 322 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 CTRB2Q6GPI1 263 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 LAMTOR1Q6IAA8 161 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 TCTEX1D2Q8WW35 142 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 HSD17B10Q99714 261 aaKnown RBP10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 UBQLN2Q9UHD9 624 aa10.53□□□□□ -0.72
CHMP1A-210ENST00000551981 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 MFSD2BA6NFX1 497 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 E7EUB6 86 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 RAB27BO00194 218 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 PDCD5O14737 125 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 TSPAN4O14817 238 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 HRASP01112 189 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 HLA-DQB1P01920 261 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 HLA-GP17693 338 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 RAB6AP20340 208 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 DTYMKP23919 212 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 GPR183P32249 361 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 RPL30P62888 115 aaKnown RBP10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 THYN1Q9P016 225 aa10.52□□□□□ -0.73
CHMP1A-210ENST00000551981 VPS13DQ5THJ4 4388 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 IGKV1D-8A0A087WSZ0 117 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 A0A1B0GW64 132 aa10.51□□□□□ -0.73
CHMP1A-210ENST00000551981 REG1AP05451 166 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms