RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ELANEP08246 267 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 RPA2P15927 270 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 RND3P61587 244 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 ZNF45Q02386 682 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 CFHR3Q02985 330 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 SURF2Q15527 256 aaPredicted RBP13.19□□□□□ -0.3
LTBR-215ENST00000546296 AKIRIN2Q53H80 203 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 PUSL1Q8N0Z8 303 aaKnown RBP13.19□□□□□ -0.3
LTBR-215ENST00000546296 FAM110DQ8TAY7 271 aaPredicted RBP13.19□□□□□ -0.3
LTBR-215ENST00000546296 TMEM167AQ8TBQ9 72 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 R3HDM4Q96D70 268 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 COMMD9Q9P000 198 aa13.19□□□□□ -0.3
LTBR-215ENST00000546296 FOXA2Q9Y261 457 aaPredicted RBP13.19□□□□□ -0.3
LTBR-215ENST00000546296 A0A1W2PN81 502 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 MSGN1A6NI15 193 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 PF4V1P10720 104 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 CD40LGP29965 261 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 PPIFP30405 207 aaKnown RBP13.18□□□□□ -0.3
LTBR-215ENST00000546296 CHRNA7P36544 502 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 CRIP2P52943 208 aaPredicted RBP13.18□□□□□ -0.3
LTBR-215ENST00000546296 MRGPRG-AS1Q2M3A8 158 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 PRR31Q5SQ13 230 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 OR4A47Q6IF82 309 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 MINDY2Q8NBR6 621 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 OR4A5Q8NH83 315 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 MRGPRFQ96AM1 343 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 ZFP57Q9NU63 452 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 SLC2A8Q9NY64 477 aa13.18□□□□□ -0.3
LTBR-215ENST00000546296 TEX13DA0A0J9YY54 714 aaPredicted RBP13.17□□□□□ -0.3
LTBR-215ENST00000546296 NUDT19A8MXV4 375 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 TSPAN15O95858 294 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 KRASP01116 189 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
LTBR-215ENST00000546296 RPL23AP62750 156 aaKnown RBP13.17□□□□□ -0.3
LTBR-215ENST00000546296 SSBP2P81877 361 aaPredicted RBP13.17□□□□□ -0.3
LTBR-215ENST00000546296 BAK1Q16611 211 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 OR5T1Q8NG75 326 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 OR4F17Q8NGA8 305 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
LTBR-215ENST00000546296 TMEM140Q9NV12 185 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 BET1LQ9NYM9 111 aa13.17□□□□□ -0.3
LTBR-215ENST00000546296 C3orf85A0A1B0GTC6 90 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 ADARB2-AS1A8MUL3 147 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 IGLV1-40P01703 118 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 MAS1LP35410 378 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 G6PCP35575 357 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 RPL8P62917 257 aaKnown RBP13.16□□□□□ -0.3
LTBR-215ENST00000546296 POU2AF1Q16633 256 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 TREML4Q6UXN2 200 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
LTBR-215ENST00000546296 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 SPIN2AQ99865 258 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 SPIN2BQ9BPZ2 258 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
LTBR-215ENST00000546296 ZNF355PQ9NSJ1 428 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 PTTG2Q9NZH5 202 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
LTBR-215ENST00000546296 TET2Q6N021 2002 aaPredicted RBP13.16□□□□□ -0.3
LTBR-215ENST00000546296 MARCH11A6NNE9 402 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 H0Y980 276 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 UPK2O00526 184 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 APELAP0DMC3 54 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 HLA-GP17693 338 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 PSMB8P28062 276 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 C19orf54Q5BKX5 351 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 C10orf55Q5SWW7 151 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 LINC00299Q6ZSB3 139 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 RNF152Q8N8N0 203 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 KLHL30-AS1Q8NEE0 82 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 MS4A10Q96PG2 267 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 FYTTD1Q96QD9 318 aaKnown RBP13.15□□□□□ -0.3
LTBR-215ENST00000546296 KLK15Q9H2R5 256 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 C5orf66Q9H5L9 145 aa13.15□□□□□ -0.3
LTBR-215ENST00000546296 PKD1L1Q8TDX9 2849 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 CENPXA8MT69 81 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 SNAPC5O75971 98 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
LTBR-215ENST00000546296 RAB9AP51151 201 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 SP6Q3SY56 376 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 CASTOR1Q8WTX7 329 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 S100ZQ8WXG8 99 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 TP53RKQ96S44 253 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 SDHCQ99643 169 aaPredicted RBP13.14□□□□□ -0.31
LTBR-215ENST00000546296 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
LTBR-215ENST00000546296 VWFP04275 2813 aa13.13□□□□□ -0.31
LTBR-215ENST00000546296 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
LTBR-215ENST00000546296 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
LTBR-215ENST00000546296 SOX15O60248 233 aa13.13□□□□□ -0.31
LTBR-215ENST00000546296 B3GALNT1O75752 331 aa13.13□□□□□ -0.31
LTBR-215ENST00000546296 ATG12O94817 140 aa13.13□□□□□ -0.31
LTBR-215ENST00000546296 IL7P13232 177 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms