RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 LYZL2Q7Z4W2 148 aa12.81□□□□□ -0.36
PRPF40A-212ENST00000545856 BCL6BQ8N143 479 aaPredicted RBP12.81□□□□□ -0.36
PRPF40A-212ENST00000545856 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
PRPF40A-212ENST00000545856 ZNF257Q9Y2Q1 563 aa12.81□□□□□ -0.36
PRPF40A-212ENST00000545856 FN1P02751 2386 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 CYSRT1A8MQ03 144 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 CRLF1O75462 422 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 CRYGBP07316 175 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 G6PCP35575 357 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 SRSF4Q08170 494 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 C5orf64Q2M2E5 130 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 GGNBP1Q5YKI7 109 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 PPP1R27Q86WC6 154 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 OR52E5Q8NH55 327 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 ZNF48Q96MX3 618 aaPredicted RBP12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 NMES1Q9C002 83 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 SIGLEC9Q9Y336 463 aa12.8□□□□□ -0.36
PRPF40A-212ENST00000545856 C15orf61A6NNL5 157 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 SRRM4A7MD48 611 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 UPK2O00526 184 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 HLA-DRB1P01911 266 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 HOXB5P09067 269 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 RPL8P62917 257 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 MRPL41Q8IXM3 137 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 UXS1Q8NBZ7 420 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 C2orf50Q96LR7 162 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 SRSF8Q9BRL6 282 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 PLSCR3Q9NRY6 295 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 MGAT4CQ9UBM8 478 aa12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 METTL1Q9UBP6 276 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 FOXA2Q9Y261 457 aaPredicted RBP12.79□□□□□ -0.36
PRPF40A-212ENST00000545856 SLC25A17O43808 307 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 BCAP31P51572 246 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 IAH1Q2TAA2 248 aaPredicted RBP12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 IL17RELQ6ZVW7 336 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 HSD17B13Q7Z5P4 300 aaPredicted RBP12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 SIGLECL1Q8N7X8 197 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 C22orf15Q8WYQ4 148 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 TMEM14BQ9NUH8 114 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 ZNF580Q9UK33 172 aa12.78□□□□□ -0.36
PRPF40A-212ENST00000545856 INAFM1C9JVW0 142 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 GOSR2O14653 212 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 PITX3O75364 302 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 MED6O75586 246 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 ADAP1O75689 374 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 ACTL6BO94805 426 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 IGHV4-59P01825 116 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 PET100P0DJ07 73 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 HILS1P60008 231 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 RELBQ01201 579 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 PLGLAQ15195 96 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 PRSS8Q16651 343 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 GPR146Q96CH1 333 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 RASL11BQ9BPW5 248 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 CACNG5Q9UF02 275 aa12.77□□□□□ -0.37
PRPF40A-212ENST00000545856 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 C5orf51A6NDU8 294 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 NCBP2LA6PVI3 153 aaKnown RBP12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 INS-IGF2F8WCM5 200 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 HOXA3O43365 443 aaPredicted RBP12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 KCNAB3O43448 404 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 RAP2BP61225 183 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 FCN2Q15485 313 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 ZNF562Q6V9R5 426 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 SSX9Q7RTT3 188 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 C5orf56Q8N8D9 126 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 Q8N9W7 124 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 ZBTB8BQ8NAP8 495 aaPredicted RBP12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 FYTTD1Q96QD9 318 aaKnown RBP12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 COMMD5Q9GZQ3 224 aa12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
PRPF40A-212ENST00000545856 MDFIC2A0A1B0GVS7 189 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 CD24P25063 80 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 PAX6P26367 422 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 F2RL1P55085 397 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 SPCS3P61009 180 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 HSPE1P61604 102 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 FGL1Q08830 312 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 HNF4GQ14541 408 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 VKORC1L1Q8N0U8 176 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 OR4D5Q8NGN0 318 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 OR1L8Q8NGR8 309 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 OR1S1Q8NH92 325 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 ZNF436Q9C0F3 470 aaPredicted RBP12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 HSPB7Q9UBY9 170 aa12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 TET2Q6N021 2002 aaPredicted RBP12.75□□□□□ -0.37
PRPF40A-212ENST00000545856 A0A0G2JRQ6 117 aa12.74□□□□□ -0.37
PRPF40A-212ENST00000545856 PLXNB1O43157 2135 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms