RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CXorf65A6NEN9 183 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 LGALS7P47929 136 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 GNG2P59768 71 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 UBE2NLQ5JXB2 153 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 GPR107Q5VW38 600 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 GVQW1Q8N7I0 195 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
USP28-212ENST00000544750 KCTD12Q96CX2 325 aaKnown RBP9.6□□□□□ -0.87
USP28-212ENST00000544750 OR2D2Q9H210 308 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 SDHAF2Q9NX18 166 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
USP28-212ENST00000544750 TRBV9A0A0B4J1U6 114 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 C2orf70A6NJV1 201 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 SRRM4A7MD48 611 aaKnown RBP9.59□□□□□ -0.87
USP28-212ENST00000544750 XRCC3O43542 346 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 DEDDO75618 318 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
USP28-212ENST00000544750 ZNF45Q02386 682 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 TNFRSF9Q07011 255 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 WDR89Q96FK6 387 aaPredicted RBP9.59□□□□□ -0.87
USP28-212ENST00000544750 GINS4Q9BRT9 223 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 AKIP1Q9NQ31 210 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 ANXA10Q9UJ72 324 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 ZNF221Q9UK13 617 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 FAT2Q9NYQ8 4349 aa9.59□□□□□ -0.87
USP28-212ENST00000544750 MUC4Q99102 2169 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.58□□□□□ -0.88
USP28-212ENST00000544750 IGKV1D-13A0A0B4J2D9 117 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 A0A0J9YWU9 116 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 M0R1X1 148 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 APOA2P02652 100 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 APELAP0DMC3 54 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 IGKV1-13P0DP09 117 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 FOLR2P14207 255 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
USP28-212ENST00000544750 TAS2R20P59543 309 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 GUCA2BQ16661 112 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 CNIH2Q6PI25 160 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 HOGA1Q86XE5 327 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 GGTLC1Q9BX51 225 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 DIABLOQ9NR28 239 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 SLC35D1Q9NTN3 355 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 TECRQ9NZ01 308 aaKnown RBP9.58□□□□□ -0.88
USP28-212ENST00000544750 ANAPC10Q9UM13 185 aa9.58□□□□□ -0.88
USP28-212ENST00000544750 MSGN1A6NI15 193 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 FAM223BA6NKX1 122 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 TUSC2O75896 110 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 IGLV2-14P01704 120 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 HLA-DQB1P01920 261 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 OR9G9P0C7N8 305 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 NFYAP23511 347 aaPredicted RBP9.57□□□□□ -0.88
USP28-212ENST00000544750 RHOGP84095 191 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 EXOSC2Q13868 293 aaKnown RBP9.57□□□□□ -0.88
USP28-212ENST00000544750 TMEM177Q53S58 311 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 LGALS9CQ6DKI2 356 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 GPR141Q7Z602 305 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 LYG2Q86SG7 212 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 FAM223AQ8IWN6 122 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 BEST4Q8NFU0 473 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 GATAD1Q8WUU5 269 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 S100A16Q96FQ6 103 aaKnown RBP9.57□□□□□ -0.88
USP28-212ENST00000544750 COMMD3Q9UBI1 195 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 OR2W1Q9Y3N9 320 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
USP28-212ENST00000544750 PKHD1P08F94 4074 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 DYNC1H1Q14204 4646 aaKnown RBP9.56□□□□□ -0.88
USP28-212ENST00000544750 LOC102724200A0A096LPH7 203 aaPredicted RBP9.56□□□□□ -0.88
USP28-212ENST00000544750 MEIS3P1A6NDR6 274 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 LINC00473A8K010 186 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 LGALS9O00182 355 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 PRH1P02810 166 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 FCER2P06734 321 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 CTXN2P0C2S0 81 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 DUTP33316 252 aaKnown RBP9.56□□□□□ -0.88
USP28-212ENST00000544750 SPCS2Q15005 226 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 TMEM69Q5SWH9 247 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 SLC16A13Q7RTY0 426 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 TMEM61Q8N0U2 210 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 SRSF12Q8WXF0 261 aaKnown RBP9.56□□□□□ -0.88
USP28-212ENST00000544750 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 CMTM3Q96MX0 182 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
USP28-212ENST00000544750 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 J3QRK9 145 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 HPGDSO60760 199 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 NDUFB8O95169 186 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 APOA1P02647 267 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 ELK1P19419 428 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 CBLN1P23435 193 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 RORCP51449 518 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 ATP5G2Q06055 141 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 EIF4EBP1Q13541 118 aaPredicted RBP9.55□□□□□ -0.88
USP28-212ENST00000544750 ZNF645Q8N7E2 425 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 CACNG8Q8WXS5 425 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 ACOT12Q8WYK0 555 aa9.55□□□□□ -0.88
USP28-212ENST00000544750 KLK5Q9Y337 293 aaPredicted RBP9.55□□□□□ -0.88
USP28-212ENST00000544750 TMEM213A2RRL7 107 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms