RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 VSTM2AQ8TAG5 236 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 TMEM167AQ8TBQ9 72 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 R3HDM4Q96D70 268 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 GON7Q9BXV9 100 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.52
CD9-210ENST00000543916 COPZ2Q9P299 210 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 C14orf166Q9Y224 244 aaKnown RBP11.83□□□□□ -0.52
CD9-210ENST00000543916 NUBP2Q9Y5Y2 271 aa11.83□□□□□ -0.52
CD9-210ENST00000543916 C3orf85A0A1B0GTC6 90 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 LINC00854A0A1B0GVQ3 168 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 MARCH11A6NNE9 402 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 H0Y980 276 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 CNIH1O95406 144 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 IGHG4P01861 327 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 IL6RP08887 468 aaPredicted RBP11.82□□□□□ -0.52
CD9-210ENST00000543916 C10orf55Q5SWW7 151 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 LCNL1Q6ZST4 164 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 MMD2Q8IY49 270 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 MINDY2Q8NBR6 621 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
CD9-210ENST00000543916 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 S100ZQ8WXG8 99 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 AIFM2Q9BRQ8 373 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 TMEM140Q9NV12 185 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 BET1LQ9NYM9 111 aa11.82□□□□□ -0.52
CD9-210ENST00000543916 TRAV3A0A0B4J244 114 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 TCRBV4S1A1TA0A5B7 111 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 SOX15O60248 233 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 CREBL2O60519 120 aaPredicted RBP11.81□□□□□ -0.52
CD9-210ENST00000543916 KRASP01116 189 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 MYOD1P15172 320 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 G6PCP35575 357 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 NSUN5P1Q3KNT7 163 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 SP6Q3SY56 376 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 ASPHD1Q5U4P2 390 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 TEX38Q6PEX7 206 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 UNQ5815/PRO19632Q6UWF5 114 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 NDUFA11Q86Y39 141 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 COMMD1Q8N668 190 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 SRSF12Q8WXF0 261 aaKnown RBP11.81□□□□□ -0.52
CD9-210ENST00000543916 TMEM230Q96A57 120 aa11.81□□□□□ -0.52
CD9-210ENST00000543916 A0A1W2PN81 502 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 CRYM-AS1A6NIL9 109 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 UPK2O00526 184 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 TSPAN15O95858 294 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 RPLP1P05386 114 aaKnown RBP11.8□□□□□ -0.52
CD9-210ENST00000543916 PSMB8P28062 276 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 BTCP35070 178 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 CHRNA7P36544 502 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 CCR6P51684 374 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 ERVK-16P61578 105 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 FOXE3Q13461 319 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 AKIRIN2Q53H80 203 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 KHDC1LQ5JSQ8 128 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 CCDC32Q9BV29 185 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
CD9-210ENST00000543916 TSSC4Q9Y5U2 329 aaPredicted RBP11.8□□□□□ -0.52
CD9-210ENST00000543916 VWFP04275 2813 aa11.8□□□□□ -0.52
CD9-210ENST00000543916 TEX13DA0A0J9YY54 714 aaPredicted RBP11.79□□□□□ -0.52
CD9-210ENST00000543916 A0A1B0GW64 132 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 MSGN1A6NI15 193 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 E7EUB6 86 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 M0QZ24 198 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 PLA2G10O15496 165 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 ACTL6BO94805 426 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 OPN1MWP04001 364 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 SERPINE2P07093 398 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 ELANEP08246 267 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 OR9G9P0C7N8 305 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 APELAP0DMC3 54 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 OPN1MW2P0DN77 364 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 OPN1MW3P0DN78 364 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 HLA-GP17693 338 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 UCP1P25874 307 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 CD40LGP29965 261 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 MAS1LP35410 378 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 RPL8P62917 257 aaKnown RBP11.79□□□□□ -0.52
CD9-210ENST00000543916 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
CD9-210ENST00000543916 ZNF846Q147U1 533 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 C2orf68Q2NKX9 166 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 RNF152Q8N8N0 203 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 CASTOR1Q8WTX7 329 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 SCGB3A2Q96PL1 93 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 PHB2Q99623 299 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 KLK15Q9H2R5 256 aa11.79□□□□□ -0.52
CD9-210ENST00000543916 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 TEX22C9J3V5 150 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 AKR1C4P17516 323 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
CD9-210ENST00000543916 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
CD9-210ENST00000543916 SUPT4H1P63272 117 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms