RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 ZNF735P0CB33 412 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 GNRHRP30968 328 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TAS2R20P59543 309 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 NCS1P62166 190 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 POU2AF1Q16633 256 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ZNF818PQ6ZRF7 136 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 C19orf35Q6ZS72 473 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 LYSMD2Q8IV50 215 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 Q8N1Y9 231 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR6Q1Q8NGQ2 317 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR4C12Q96R67 309 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ASCL2Q99929 193 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FUNDC2Q9BWH2 189 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SLC5A7Q9GZV3 580 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 LYSTQ99698 3801 aa10□□□□□ -0.81
TNFRSF1A-215ENST00000543359 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 BMPR1BO00238 502 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SULT1C2O00338 296 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ACTL6BO94805 426 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 LY86O95711 162 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CRYGCP07315 174 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CSN3P07498 182 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MYOD1P15172 320 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MAS1LP35410 378 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 KIR2DS2P43631 304 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 RFX2P48378 723 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MECP2P51608 486 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TMEM69Q5SWH9 247 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR4A47Q6IF82 309 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SPAG16Q8N0X2 631 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR9G4Q8NGQ1 327 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 VSTM2AQ8TAG5 236 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 KCTD12Q96CX2 325 aaKnown RBP9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ELOVL1Q9BW60 279 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 VCX3AQ9NNX9 186 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SLC2A9Q9NRM0 540 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 BET1LQ9NYM9 111 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 U3KQK5 164 aa9.99□□□□□ -0.81
TNFRSF1A-215ENST00000543359 STARD9Q9P2P6 4700 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TRAV3A0A0B4J244 114 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MPPED1O15442 326 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 HRASP01112 189 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 EIF4EP06730 217 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SMIM18P0DKX4 95 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FXYD4P59646 89 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 VBP1P61758 197 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ATP5G2Q06055 141 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ADAMTSL5Q6ZMM2 481 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SSX9Q7RTT3 188 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SBSPONQ8IVN8 264 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 NECAP1Q8NC96 275 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 GPX8Q8TED1 209 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 THAP7Q9BT49 309 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 ZNF257Q9Y2Q1 563 aa9.98□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TENM2Q9NT68 2774 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR2J3O76001 311 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 HPRT1P00492 218 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 APOA1P02647 267 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 PMP2P02689 132 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 AREGP15514 252 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CTRB1P17538 263 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 PRSS3P35030 304 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TAS2R31P59538 309 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CTRB2Q6GPI1 263 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 TMEM17Q86X19 198 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 OR4A5Q8NH83 315 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 CMTM3Q96MX0 182 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 NAA50Q9GZZ1 169 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 IFT46Q9NQC8 304 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 EHFQ9NZC4 300 aa9.97□□□□□ -0.81
TNFRSF1A-215ENST00000543359 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.81
TNFRSF1A-215ENST00000543359 UPK2O00526 184 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 NDUFB8O95169 186 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FRMD6-AS1P0C7T7 363 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 NQO2P16083 231 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HLA-GP17693 338 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ELK1P19419 428 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 PSMB6P28072 239 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR2B8PP59922 312 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 EXOSC2Q13868 293 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CTF1Q16619 201 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 SLC25A42Q86VD7 318 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ANKRD13BQ86YJ7 626 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ZNF2Q9BSG1 426 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 PLEKHA2Q9HB19 425 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 COMMD3Q9UBI1 195 aa9.96□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IZUMO1RA6ND01 250 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms