RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 OR4A47Q6IF82 309 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 Q6ZSV7 163 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 LYG2Q86SG7 212 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 LGI3Q8N145 548 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 CASTOR1Q8WTX7 329 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 SEC22AQ96IW7 307 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 TMEM56Q96MV1 263 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 OR2A7Q96R45 310 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 MARVELD1Q9BSK0 173 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 RANBP3Q9H6Z4 567 aaPredicted RBP9.2□□□□□ -0.94
YBX3-213ENST00000542641 TPSG1Q9NRR2 321 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 TMEM140Q9NV12 185 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 TMEM56-RWDD3S4R434 201 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 JMJD1CQ15652 2540 aa9.2□□□□□ -0.94
YBX3-213ENST00000542641 CREBL2O60519 120 aaPredicted RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 TSPAN9O75954 239 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 KBTBD11O94819 623 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 CA2P00918 260 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 AKR1C2P52895 323 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 RAG2P55895 527 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 GNB1P62873 340 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 PJVKQ0ZLH3 352 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 ANKRD55Q3KP44 614 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 Q6ZS46 218 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 H2BFWTQ7Z2G1 175 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 PUSL1Q8N0Z8 303 aaKnown RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 OR4A5Q8NH83 315 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 RNASE11Q8TAA1 199 aaKnown RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 TMEM167AQ8TBQ9 72 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 RBPMSQ93062 196 aaKnown RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 RRNAD1Q96FB5 475 aaKnown RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 ZNF430Q9H8G1 570 aaPredicted RBP9.19□□□□□ -0.94
YBX3-213ENST00000542641 ZNF702PQ9H963 129 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 BET1LQ9NYM9 111 aa9.19□□□□□ -0.94
YBX3-213ENST00000542641 PIGBOS1A0A0B4J2F0 54 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 NDUFA7O95182 113 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 CNIH1O95406 144 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
YBX3-213ENST00000542641 DHFRP00374 187 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 IGKV1-5P01602 117 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 IL5P05113 134 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 CX3CL1P78423 397 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 PRSS8Q16651 343 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 LYZL2Q7Z4W2 148 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 SLC35E3Q7Z769 313 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 MMD2Q8IY49 270 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 CADM3Q8N126 398 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.18□□□□□ -0.94
YBX3-213ENST00000542641 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 OR52B4Q8NGK2 314 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 OR2T6Q8NHC8 308 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 COQ8AQ8NI60 647 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 HSPB9Q9BQS6 159 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 SEC22CQ9BRL7 303 aa9.18□□□□□ -0.94
YBX3-213ENST00000542641 IGHV7-81A0A0B4J1V7 117 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 TRAV3A0A0B4J244 114 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 A0A0B4J2A0 478 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 LINC01548A6NM66 108 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 UPK2O00526 184 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 KCNAB3O43448 404 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 PRAF2O60831 178 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 SNAPC5O75971 98 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 ACTL6BO94805 426 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 IGHG2P01859 326 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 IL6RP08887 468 aaPredicted RBP9.17□□□□□ -0.94
YBX3-213ENST00000542641 HKR1P10072 659 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
YBX3-213ENST00000542641 FXYD3Q14802 87 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 TNXAQ16473 311 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 MRGPRG-AS1Q2M3A8 158 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 Q8N2B8 174 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 LRTM2Q8N967 370 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 OR4F5Q8NH21 305 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 ZNF431Q8TF32 576 aaPredicted RBP9.17□□□□□ -0.94
YBX3-213ENST00000542641 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 LSM10Q969L4 123 aaKnown RBP9.17□□□□□ -0.94
YBX3-213ENST00000542641 PHB2Q99623 299 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 OR51J1Q9H342 316 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 C16orf95Q9H693 158 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 GPN1Q9HCN4 374 aaPredicted RBP9.17□□□□□ -0.94
YBX3-213ENST00000542641 SHPKQ9UHJ6 478 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 NSG2Q9Y328 171 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 MMP24Q9Y5R2 645 aa9.17□□□□□ -0.94
YBX3-213ENST00000542641 RBMXL2O75526 392 aaKnown RBP9.16□□□□□ -0.94
YBX3-213ENST00000542641 HOXB5P09067 269 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 OR9G9P0C7N8 305 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 HLA-GP17693 338 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 VDAC1P21796 283 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 MAS1LP35410 378 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 VDAC2P45880 294 aaPredicted RBP9.16□□□□□ -0.94
YBX3-213ENST00000542641 RIPPLY3P57055 190 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 OXA1LQ15070 435 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 IZUMO4Q1ZYL8 232 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
YBX3-213ENST00000542641 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms