RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 TRAV1-1A0A0B4J248 108 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 IGHV1-18A0A0C4DH31 117 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 ZNF718Q3SXZ3 478 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 MRPL41Q8IXM3 137 aaKnown RBP11.71□□□□□ -0.53
INO80E-203ENST00000540562 OR6C3Q9NZP0 311 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 CD82P27701 267 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 GNB1P62873 340 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 DPPA3Q6W0C5 159 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 C22orf34Q6ZV56 151 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 AGMATQ9BSE5 352 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
INO80E-203ENST00000540562 WNK2Q9Y3S1 2297 aa11.71□□□□□ -0.54
INO80E-203ENST00000540562 PMS2P5A8MQ11 134 aa11.71□□□□□ -0.54
INO80E-203ENST00000540562 AMBPP02760 352 aa11.71□□□□□ -0.54
INO80E-203ENST00000540562 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.54
INO80E-203ENST00000540562 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.54
INO80E-203ENST00000540562 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.54
INO80E-203ENST00000540562 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.54
INO80E-203ENST00000540562 TAAR6Q96RI8 345 aa11.71□□□□□ -0.54
INO80E-203ENST00000540562 DBX2Q6ZNG2 339 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 CYP2G1PQ6ZSU1 146 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 NEIL1Q96FI4 390 aaPredicted RBP11.7□□□□□ -0.54
INO80E-203ENST00000540562 SEPSECSQ9HD40 501 aaKnown RBP11.7□□□□□ -0.54
INO80E-203ENST00000540562 A0A087X0M5 115 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 A0A1B0GX30 115 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 DUTP33316 252 aaKnown RBP11.7□□□□□ -0.54
INO80E-203ENST00000540562 DLX1P56177 255 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
INO80E-203ENST00000540562 IGF2RP11717 2491 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■□□□ 13
INO80E-203ENST00000540562 MMP23AO75900 390 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 OR10J4P0C629 311 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 OR5I1Q13606 314 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 TMEM256Q8N2U0 113 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 FAM216BQ8N7L0 139 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 DMRT1Q9Y5R6 373 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 NPIPB11E5RHQ5 1161 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 PFN1P07737 140 aaKnown RBP11.69□□□□□ -0.54
INO80E-203ENST00000540562 TCL1AP56279 114 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 CCL8P80075 99 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 INO80CQ6PI98 192 aaPredicted RBP11.69□□□□□ -0.54
INO80E-203ENST00000540562 GCSAMQ8N6F7 178 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 NHLRC2Q8NBF2 726 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 OR2T10Q8NGZ9 312 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 S1PR3Q99500 378 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 CCL13Q99616 98 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 LRFN3Q9BTN0 628 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 GCM1Q9NP62 436 aa11.69□□□□□ -0.54
INO80E-203ENST00000540562 ZMAT5Q9UDW3 170 aaKnown RBP11.69□□□□□ -0.54
INO80E-203ENST00000540562 TRBV20OR9-2A0A075B6H5 130 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 ERVK-16P61578 105 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 SGMS2Q8NHU3 365 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 IER2Q9BTL4 223 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 PXMP4Q9Y6I8 212 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 DCHS2Q6V1P9 2916 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 B4DEV8 164 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 NUPR1O60356 82 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 MAS1LP35410 378 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 MORN2Q502X0 79 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 LINC00469Q8N7U9 141 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 OR4P4Q8NGL7 312 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 MGST2Q99735 147 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 PROCRQ9UNN8 238 aa11.68□□□□□ -0.54
INO80E-203ENST00000540562 COL27A1Q8IZC6 1860 aaPredicted RBP11.67□□□□□ -0.54
INO80E-203ENST00000540562 K7EM74 188 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 IGKV3-15P01624 115 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
INO80E-203ENST00000540562 CBLN1P23435 193 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 RND2P52198 227 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
INO80E-203ENST00000540562 SCGB1D1O95968 90 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 HRASP01112 189 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 NDUFB7P17568 137 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 IL3RAP26951 378 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 TMEM170AQ8WVE7 144 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 P2RX4Q99571 388 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 HSD17B10Q99714 261 aaKnown RBP11.67□□□□□ -0.54
INO80E-203ENST00000540562 HIPK2Q9H2X6 1198 aa11.67□□□□□ -0.54
INO80E-203ENST00000540562 RALYQ9UKM9 306 aaKnown RBP11.67□□□□□ -0.54
INO80E-203ENST00000540562 ZNF729A6NN14 1252 aaPredicted RBP11.66□□□□□ -0.54
INO80E-203ENST00000540562 C17orf112F2Z3M2 114 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 IGKV1-16P04430 117 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 OR4A8P0C604 315 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 NUBP1P53384 320 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 BHLHA15Q7RTS1 189 aaPredicted RBP11.66□□□□□ -0.54
INO80E-203ENST00000540562 ATG101Q9BSB4 218 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 BSNQ9UPA5 3926 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms