RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 LY6HO94772 140 aa16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 RELBQ01201 579 aa16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 PDLIM3Q53GG5 364 aaPredicted RBP16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 TMEM41BQ5BJD5 291 aa16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 LRRC10Q5BKY1 277 aa16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 CENPVQ7Z7K6 275 aaPredicted RBP16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 ZNF383Q8NA42 475 aa16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 ZNF714Q96N38 554 aa16.58■□□□□ 0.25
PACSIN3-211ENST00000539589 CHD6Q8TD26 2715 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 A6NNC1 897 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 DAOP14920 347 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 SRSF1Q07955 248 aaKnown RBP eCLIP16.58■□□□□ 0.247e-7■□□□□ 10.4
PACSIN3-211ENST00000539589 HAGHQ16775 308 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 HFEQ30201 348 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 ZNF429Q86V71 674 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 VSIRQ9H7M9 311 aa16.58■□□□□ 0.24
PACSIN3-211ENST00000539589 OR13C7P0DN81 318 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 HEPN1Q6WQI6 88 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 CLDND2Q8NHS1 167 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 MBD3L1Q8WWY6 194 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 RHOVQ96L33 236 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 UNKLQ9H9P5 680 aaKnown RBP16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 CTSZQ9UBR2 303 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 C15orf62A8K5M9 175 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 VWC2Q2TAL6 325 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 SOHLH1Q5JUK2 328 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 ZNF506Q5JVG8 444 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 TMEM200BQ69YZ2 307 aa16.57■□□□□ 0.24
PACSIN3-211ENST00000539589 HRASP01112 189 aa16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 ARG1P05089 322 aa16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 FGF7P21781 194 aa16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 H1FXQ92522 213 aaKnown RBP16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 RCC1LQ96I51 464 aaKnown RBP16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 RAB1BQ9H0U4 201 aa16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 UBTD1Q9HAC8 227 aa16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 HEYLQ9NQ87 328 aaPredicted RBP16.56■□□□□ 0.24
PACSIN3-211ENST00000539589 TRAV3A0A0B4J244 114 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 NDUFA2O43678 99 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 HSPB1P04792 205 aaKnown RBP16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 ELLP55199 621 aaPredicted RBP16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 RPS16P62249 146 aaKnown RBP16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 ZNF787Q6DD87 383 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 OR4A47Q6IF82 309 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 KAAG1Q9UBP8 84 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 C15orf61A6NNL5 157 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 IFNA10P01566 189 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 CCL3L1P16619 93 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 VDAC2P45880 294 aaPredicted RBP16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 ICAM4Q14773 271 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 ZNF726P1Q15940 193 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 RTL8BQ17RB0 113 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 KHDC3LQ587J8 217 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 LCN15Q6UWW0 184 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 RAB39BQ96DA2 213 aa16.55■□□□□ 0.24
PACSIN3-211ENST00000539589 M0R036 132 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 DVL1O14640 695 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 MBP02144 154 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 CT45A6P0DMU7 189 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 CT45A5P0DMU8 189 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 CT45A7P0DMV0 189 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 POU2AF1Q16633 256 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 AKIRIN2Q53H80 203 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 ZNF709Q8N972 641 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 AIFM2Q9BRQ8 373 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 SMCO4Q9NRQ5 59 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 TCF19Q9Y242 345 aa16.54■□□□□ 0.24
PACSIN3-211ENST00000539589 SRP19P09132 144 aaKnown RBP16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 ERVFRD-1P60508 538 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 AWAT1Q58HT5 328 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 RPS10P5Q9NQ39 176 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 GNG13Q9P2W3 67 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 FOXA2Q9Y261 457 aaPredicted RBP16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 LRRK2Q5S007 2527 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 IGHV2-70P01814 119 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 CDKN1AP38936 164 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 HOXA1P49639 335 aaPredicted RBP16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 ZNF833PQ6ZTB9 187 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 RXFP4Q8TDU9 374 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 NPCDR1Q9BY65 106 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 SLC35D1Q9NTN3 355 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 TMEM14BQ9NUH8 114 aa16.53■□□□□ 0.24
PACSIN3-211ENST00000539589 CRYBG3Q68DQ2 2970 aa16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 C17orf112F2Z3M2 114 aa16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 MDKP21741 143 aaPredicted RBP16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 HSPE1P61604 102 aaKnown RBP16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 HNF4GQ14541 408 aa16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 MALRD1Q5VYJ5 2156 aa16.52■□□□□ 0.24
PACSIN3-211ENST00000539589 FAM208BQ5VWN6 2430 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 LOC102723971A0A1B0GUV8 181 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 MAP1LC3B2A6NCE7 125 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 H7C2Y5 167 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 NDUFS7O75251 213 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 SNRNP70P08621 437 aaKnown RBP16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 CD1BP29016 333 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 AVPI1Q5T686 147 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 ETV3LQ6ZN32 361 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 SSX7Q7RTT5 188 aa16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 RPP25LQ8N5L8 163 aaKnown RBP16.52■□□□□ 0.23
PACSIN3-211ENST00000539589 OR13D1Q8NGV5 346 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms