RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 NDUFA3O95167 84 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 CRYGBP07316 175 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 HOXB5P09067 269 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 KIR2DS2P43631 304 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 KRTAP10-3P60369 221 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 TAGLNQ01995 201 aaKnown RBP10.3□□□□□ -0.76
CCDC42-202ENST00000539522 HES1Q14469 280 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 KRTAP21-3Q3LHN1 58 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 OR2B11Q5JQS5 317 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 TMEM268Q5VZI3 342 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 NPBQ8NG41 125 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 TCTEX1D2Q8WW35 142 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 RBPMSQ93062 196 aaKnown RBP10.3□□□□□ -0.76
CCDC42-202ENST00000539522 SEC22AQ96IW7 307 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 C2orf50Q96LR7 162 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 PDCD10Q9BUL8 212 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 TPSG1Q9NRR2 321 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 SLC35D1Q9NTN3 355 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 PRELID3BQ9Y3B1 194 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 WASHC3Q9Y3C0 194 aa10.3□□□□□ -0.76
CCDC42-202ENST00000539522 BTBD17A6NE02 478 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 ADAP1O75689 374 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 SNAPC5O75971 98 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 NDUFA7O95182 113 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 APOA2P02652 100 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 C1QBP02746 253 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 MDKP21741 143 aaPredicted RBP10.29□□□□□ -0.76
CCDC42-202ENST00000539522 VDAC1P21796 283 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 MC5RP33032 325 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 LPAR6P43657 344 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 RPL15P61313 204 aaKnown RBP10.29□□□□□ -0.76
CCDC42-202ENST00000539522 FGL1Q08830 312 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 ZFP69Q49AA0 526 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 ZNF585BQ52M93 769 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 TMEM177Q53S58 311 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 PDPNQ86YL7 162 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 SPAG16Q8N0X2 631 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 OR2T35Q8NGX2 323 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 LINC01006Q8NI28 216 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
CCDC42-202ENST00000539522 HSPB9Q9BQS6 159 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 NMES1Q9C002 83 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 C16orf95Q9H693 158 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 SERTAD4Q9NUC0 356 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 PITPNC1Q9UKF7 332 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 MOB4Q9Y3A3 225 aa10.29□□□□□ -0.76
CCDC42-202ENST00000539522 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 FCN1O00602 326 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 CCSO14618 274 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 RBFOX2O43251 390 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC42-202ENST00000539522 IGKV1-39P01597 117 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 IGKV1D-39P04432 117 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 RRASP10301 218 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 PSG5Q15238 335 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 DHRS7BQ6IAN0 325 aaPredicted RBP10.28□□□□□ -0.76
CCDC42-202ENST00000539522 C16orf82Q7Z2V1 217 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 LHFPL5Q8TAF8 219 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
CCDC42-202ENST00000539522 HYLS1Q96M11 299 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 COMMD9Q9P000 198 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 STAB1Q9NY15 2570 aa10.28□□□□□ -0.76
CCDC42-202ENST00000539522 BOLA2-SMG1P6H3BVE0 249 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 H7C2Y5 167 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 NBR2O15453 112 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 FGF16O43320 207 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 FCGR3BO75015 233 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 CRYZL1O95825 349 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 HPRT1P00492 218 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 SLC25A6P12236 298 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 EIF2B2P49770 351 aaKnown RBP10.27□□□□□ -0.77
CCDC42-202ENST00000539522 NDPQ00604 133 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 RTL8BQ17RB0 113 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 IAH1Q2TAA2 248 aaPredicted RBP10.27□□□□□ -0.77
CCDC42-202ENST00000539522 HIST2H2BDQ6DRA6 164 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 VKORC1L1Q8N0U8 176 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 SLC35G3Q8N808 338 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 OR10C1Q96KK4 312 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 SPIN2AQ99865 258 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 SPIN2BQ9BPZ2 258 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 PLEKHA2Q9HB19 425 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 ZFP57Q9NU63 452 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 GSKIPQ9P0R6 139 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 CMYA5Q8N3K9 4069 aa10.27□□□□□ -0.77
CCDC42-202ENST00000539522 A0A1B0GU03 582 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 RRHO14718 337 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 IL6RP08887 468 aaPredicted RBP10.26□□□□□ -0.77
CCDC42-202ENST00000539522 PSMB6P28072 239 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 COMPP49747 757 aaPredicted RBP10.26□□□□□ -0.77
CCDC42-202ENST00000539522 PROK1P58294 105 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 PJVKQ0ZLH3 352 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 IL15RAQ13261 267 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 MMDQ15546 238 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 C5orf64Q2M2E5 130 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 FAM219AQ8IW50 185 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 OR4C13Q8NGP0 309 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms