RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 FAM71E2Q8N5Q1 922 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 DMBX1Q8NFW5 382 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 RNASE11Q8TAA1 199 aaKnown RBP7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 CD300LFQ8TDQ1 290 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 MAGT1Q9H0U3 335 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 PLSCR3Q9NRY6 295 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 COMMD9Q9P000 198 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 CDC42EP3Q9UKI2 254 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 RCL1Q9Y2P8 373 aaKnown RBP7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 WASHC3Q9Y3C0 194 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 PLXNB1O43157 2135 aa7.36□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRKDCP78527 4128 aaKnown RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 TNCP24821 2201 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 FXYD6-FXYD2A0A087WZ82 144 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 A0A1B0GU03 582 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 MARCH11A6NNE9 402 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 SHOXO15266 292 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 NQO2P16083 231 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 CXCL2P19875 107 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 RAB13P51153 203 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 LGALS4P56470 323 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 OR2B8PP59922 312 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 S100A10P60903 97 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 RPS16P62249 146 aaKnown RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 POLR2GP62487 172 aaKnown RBP eCLIP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRR20EP86478 221 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRR20CP86479 221 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRR20DP86480 221 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRR20BP86481 221 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRR20AP86496 221 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 CYCSP99999 105 aaKnown RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 RELBQ01201 579 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 ID3Q02535 119 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 SMCO1Q147U7 214 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 RTL8BQ17RB0 113 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 MRGPRG-AS1Q2M3A8 158 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 LGALSLQ3ZCW2 172 aaPredicted RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 MINOS1Q5TGZ0 78 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 OR4A47Q6IF82 309 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 H2BFWTQ7Z2G1 175 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 PDPNQ86YL7 162 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 RRNAD1Q96FB5 475 aaKnown RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 RHOVQ96L33 236 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 QTRT1Q9BXR0 403 aaKnown RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 TPSG1Q9NRR2 321 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 TMEM140Q9NV12 185 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 MBD2Q9UBB5 411 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 TBL2Q9Y4P3 447 aaKnown RBP7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 MINOS1-NBL1R4GNA1 71 aa7.35□□□□□ -1.23
RTN4IP1-204ENST00000539449 A0A0U1RQK1 487 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 MSGN1A6NI15 193 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 FAM90A9PA6NNJ1 464 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 UPK2O00526 184 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 VENTXO95231 258 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 TMEM50AO95807 157 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 CRYGBP07316 175 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SNRNP70P08621 437 aaKnown RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SAA1P0DJI8 122 aaPredicted RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 RRASP10301 218 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SLC25A4P12235 298 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SLC25A6P12236 298 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 LYL1P12980 280 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 MC5RP33032 325 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 CEACAM3P40198 252 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 PAX9P55771 341 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 HABP2Q14520 560 aaPredicted RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 HNF4GQ14541 408 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SPINK9Q5DT21 86 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 CYB5R2Q6BCY4 276 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 THOC7Q6I9Y2 204 aaKnown RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 DHRS7BQ6IAN0 325 aaPredicted RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 PRSS54Q6PEW0 395 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 PUSL1Q8N0Z8 303 aaKnown RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 OR8H3Q8N146 312 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 C9orf62Q8N4C0 152 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 FLYWCH2Q96CP2 140 aaKnown RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 HARBI1Q96MB7 349 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SPIN2AQ99865 258 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 SPIN2BQ9BPZ2 258 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 MS4A7Q9GZW8 240 aaPredicted RBP7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 POMT1Q9Y6A1 747 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 TRRAPQ9Y4A5 3859 aa7.34□□□□□ -1.23
RTN4IP1-204ENST00000539449 MDFIC2A0A1B0GVS7 189 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 RNF222A6NCQ9 220 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 OOSP1A8MZH6 123 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 ARPC5O15511 151 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 ST8SIA3O43173 380 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 TXNL1O43396 289 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 SLC25A17O43808 307 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 HRASP01112 189 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 FSHBP01225 129 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 GATA3P23771 443 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 CD1BP29016 333 aa7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 NKX2-1P43699 371 aaPredicted RBP7.33□□□□□ -1.24
RTN4IP1-204ENST00000539449 F2RL1P55085 397 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms