RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 LUMP51884 338 aaPredicted RBP5.44□□□□□ -1.54
YBX3-206ENST00000536823 GNB1P62873 340 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 SSBP2P81877 361 aaPredicted RBP5.44□□□□□ -1.54
YBX3-206ENST00000536823 ZNF616Q08AN1 781 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 TMEM267Q0VDI3 215 aaPredicted RBP5.44□□□□□ -1.54
YBX3-206ENST00000536823 AKIRIN2Q53H80 203 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 ACTBL2Q562R1 376 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 IDNKQ5T6J7 187 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 C9orf66Q5T8R8 295 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 ASPHD1Q5U4P2 390 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 CNIH2Q6PI25 160 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 UNQ5815/PRO19632Q6UWF5 114 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 ZNF645Q8N7E2 425 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 TSPAN14Q8NG11 270 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 GRPEL2Q8TAA5 225 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 DDB2Q92466 427 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 YIPF6Q96EC8 236 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 CLCC1Q96S66 551 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 FAM103A1Q9BTL3 118 aaKnown RBP5.44□□□□□ -1.54
YBX3-206ENST00000536823 ST6GALNAC5Q9BVH7 336 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 ZMAT5Q9UDW3 170 aaKnown RBP5.44□□□□□ -1.54
YBX3-206ENST00000536823 SPATA2Q9UM82 520 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 OR2W1Q9Y3N9 320 aa5.44□□□□□ -1.54
YBX3-206ENST00000536823 TRAV18A0A075B6X5 111 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 IGKV1D-13A0A0B4J2D9 117 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 TRIM64CA6NLI5 447 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 SRRM4A7MD48 611 aaKnown RBP5.43□□□□□ -1.54
YBX3-206ENST00000536823 LINC00473A8K010 186 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 SEC14L6B5MCN3 397 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 ARPC1BO15143 372 aaKnown RBP5.43□□□□□ -1.54
YBX3-206ENST00000536823 AIREO43918 545 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 SLC22A5O76082 557 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 CRYZL1O95825 349 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 HLA-DQB1P01920 261 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 CRYGBP07316 175 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 LGALS1P09382 135 aaKnown RBP5.43□□□□□ -1.54
YBX3-206ENST00000536823 IGKV1-13P0DP09 117 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 NFYAP23511 347 aaPredicted RBP5.43□□□□□ -1.54
YBX3-206ENST00000536823 TGFBR1P36897 503 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 UBE2KP61086 200 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 PJVKQ0ZLH3 352 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 FXYD3Q14802 87 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 VMA21Q3ZAQ7 101 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 CROCCP3Q8IVE0 287 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 LFNGQ8NES3 379 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 OR11H1Q8NG94 326 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 OR1N2Q8NGR9 330 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 CASTOR1Q8WTX7 329 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 OR5B12Q96R08 314 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 AUNIPQ9H7T9 357 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 ANXA10Q9UJ72 324 aa5.43□□□□□ -1.54
YBX3-206ENST00000536823 RBMX2Q9Y388 322 aaKnown RBP5.43□□□□□ -1.54
YBX3-206ENST00000536823 LINC01619G3V211 115 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 H3BUA1 57 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 J3QRK9 145 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 CNIH1O95406 144 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 CD40LGP29965 261 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 CBX5P45973 191 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 TPPP2P59282 170 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 ARPC4P59998 168 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 EIF4EBP1Q13541 118 aaPredicted RBP5.42□□□□□ -1.54
YBX3-206ENST00000536823 DCTN2Q13561 401 aaKnown RBP5.42□□□□□ -1.54
YBX3-206ENST00000536823 MSMO1Q15800 293 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 PRSS8Q16651 343 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 MRGPRG-AS1Q2M3A8 158 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 KCTD9Q7L273 389 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 HOGA1Q86XE5 327 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 GVQW1Q8N7I0 195 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 TEX45Q8NA69 505 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 POC5Q8NA72 575 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 BEST4Q8NFU0 473 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 OR4S2Q8NH73 311 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 OSR1Q8TAX0 266 aaPredicted RBP5.42□□□□□ -1.54
YBX3-206ENST00000536823 ALX4Q9H161 411 aaPredicted RBP5.42□□□□□ -1.54
YBX3-206ENST00000536823 SLA2Q9H6Q3 261 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 DIABLOQ9NR28 239 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 MRPS7Q9Y2R9 242 aaKnown RBP5.42□□□□□ -1.54
YBX3-206ENST00000536823 PRELID3BQ9Y3B1 194 aa5.42□□□□□ -1.54
YBX3-206ENST00000536823 IGHV4OR15-8A0A075B7B6 117 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 A0A087WW49 117 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 OVOL1O14753 267 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 XRCC3O43542 346 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 CREBL2O60519 120 aaPredicted RBP5.41□□□□□ -1.54
YBX3-206ENST00000536823 RAMP3O60896 148 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 FCGR3BO75015 233 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 BRI3O95415 125 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 IGLV2-14P01704 120 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 IGHV3-11P01762 117 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 TRGV3P03979 118 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 SAA1P0DJI8 122 aaPredicted RBP5.41□□□□□ -1.54
YBX3-206ENST00000536823 PTHLHP12272 177 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 AADACP22760 399 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 INSL3P51460 131 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 LSM3P62310 102 aaKnown RBP5.41□□□□□ -1.54
YBX3-206ENST00000536823 RPL30P62888 115 aaKnown RBP5.41□□□□□ -1.54
YBX3-206ENST00000536823 CDK10Q15131 360 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 TNXAQ16473 311 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 OR2B11Q5JQS5 317 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 UBE2NLQ5JXB2 153 aa5.41□□□□□ -1.54
YBX3-206ENST00000536823 ZNF66Q6ZN08 573 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms