RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, human

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN11-204	ENST00000531326	OSR1	Q8TAX0	266 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN11-204	ENST00000531326	ZFAND1	Q8TCF1	268 aa		13.96	□□□□□ -0.17
PTPN11-204	ENST00000531326	HSPB9	Q9BQS6	159 aa		13.96	□□□□□ -0.17
PTPN11-204	ENST00000531326	CCDC32	Q9BV29	185 aa		13.96	□□□□□ -0.17
PTPN11-204	ENST00000531326	KIAA1456	Q9P272	454 aa		13.96	□□□□□ -0.17
PTPN11-204	ENST00000531326	GPR132	Q9UNW8	380 aa		13.96	□□□□□ -0.17
PTPN11-204	ENST00000531326	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	SLC25A17	O43808	307 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	HLA-DRB1	P01911	266 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	INPP1	P49441	399 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	PIGP	P57054	158 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	ZNF846	Q147U1	533 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	LCNL1	Q6ZST4	164 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	FOXRED2	Q8IWF2	684 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	WDR12	Q9GZL7	423 aa	Known RBP	13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	C5orf66	Q9H5L9	145 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	TPSG1	Q9NRR2	321 aa		13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	METTL1	Q9UBP6	276 aa	Known RBP	13.95	□□□□□ -0.18
PTPN11-204	ENST00000531326	LINC00854	A0A1B0GVQ3	168 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	CCL24	O00175	119 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	FCN1	O00602	326 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	MPPED1	O15442	326 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	RPLP1	P05386	114 aa	Known RBP	13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	F2R	P25116	425 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	S100G	P29377	79 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	VSIG4	Q9Y279	399 aa		13.94	□□□□□ -0.18
PTPN11-204	ENST00000531326	IGHV7-81	A0A0B4J1V7	117 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	PLA2G10	O15496	165 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	UBE2K	P61086	200 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	DCTN2	Q13561	401 aa	Known RBP	13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	MRGPRG-AS1	Q2M3A8	158 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	DEFB136	Q30KP8	78 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	ZNF585B	Q52M93	769 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	LIN54	Q6MZP7	749 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	TEX38	Q6PEX7	206 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	POC5	Q8NA72	575 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	CD300LF	Q8TDQ1	290 aa		13.93	□□□□□ -0.18
PTPN11-204	ENST00000531326	NAP1L6	A6NFF2	107 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	AP4M1	O00189	453 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	S1PR2	O95136	353 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	HPRT1	P00492	218 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	SAA1	P0DJI8	122 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	BTC	P35070	178 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	RAB25	P57735	213 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	PLGLA	Q15195	96 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	VKORC1L1	Q8N0U8	176 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	TCTEX1D1	Q8N7M0	179 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	TEX45	Q8NA69	505 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	CLCC1	Q96S66	551 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	C7orf50	Q9BRJ6	194 aa	Known RBP	13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	PLEKHA2	Q9HB19	425 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	COPZ2	Q9P299	210 aa		13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	C14orf166	Q9Y224	244 aa	Known RBP	13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	LSM4	Q9Y4Z0	139 aa	Known RBP	13.92	□□□□□ -0.18
PTPN11-204	ENST00000531326	CA2	P00918	260 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	LPAR6	P43657	344 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	CCR6	P51684	374 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	TAS2R31	P59538	309 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	CX3CL1	P78423	397 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	SSBP2	P81877	361 aa	Predicted RBP	13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	NDP	Q00604	133 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	PJVK	Q0ZLH3	352 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	VMA21	Q3ZAQ7	101 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	PPP1R27	Q86WC6	154 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	PUSL1	Q8N0Z8	303 aa	Known RBP	13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	RNF152	Q8N8N0	203 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	CCDC71L	Q8N9Z2	235 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	TMEM230	Q96A57	120 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	SCGB3A2	Q96PL1	93 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	COMMD9	Q9P000	198 aa		13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326	ZMAT5	Q9UDW3	170 aa	Known RBP	13.91	□□□□□ -0.18
PTPN11-204	ENST00000531326		H0Y980	276 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	UPK1B	O75841	260 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	HRAS	P01112	189 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	CDX1	P47902	265 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	CFHR3	Q02985	330 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	POU2AF1	Q16633	256 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	ADAD2	Q8NCV1	583 aa	Known RBP	13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	RHOV	Q96L33	236 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	PRR25	Q96S07	402 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	TP53RK	Q96S44	253 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	OR51J1	Q9H342	316 aa		13.9	□□□□□ -0.18
PTPN11-204	ENST00000531326	C3orf85	A0A1B0GTC6	90 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	CRYM-AS1	A6NIL9	109 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	ARPC1B	O15143	372 aa	Known RBP	13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	LYRM1	O43325	122 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	IGKV1-39	P01597	117 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	IGKV1D-39	P04432	117 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	IGF1	P05019	195 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	NHLRC4	P0CG21	123 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	NQO2	P16083	231 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	IFITM3	Q01628	133 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	FOXE3	Q13461	319 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	RBMS2	Q15434	407 aa	Known RBP	13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	PRSS8	Q16651	343 aa		13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.89	□□□□□ -0.19
PTPN11-204	ENST00000531326	ZNF562	Q6V9R5	426 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms