RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 MMD2Q8IY49 270 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 CMTM1Q8IZ96 169 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 ARRDC1Q8N5I2 433 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 OR5T1Q8NG75 326 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 CD300LFQ8TDQ1 290 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 SRSF12Q8WXF0 261 aaKnown RBP12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 DGCR14Q96DF8 476 aaKnown RBP12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 TMEM68Q96MH6 324 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 VSIG4Q9Y279 399 aa12.52□□□□□ -0.41
TSPAN4-218ENST00000529566 BRI3O95415 125 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 CD33P20138 364 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 F2RP25116 425 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 TAS2R31P59538 309 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 TAS2R19P59542 299 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 FHL3Q13643 280 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 PHLDA2Q53GA4 152 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 OR4A47Q6IF82 309 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 SLC38A6Q8IZM9 456 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 BET1LQ9NYM9 111 aa12.51□□□□□ -0.41
TSPAN4-218ENST00000529566 A0A1B0GW64 132 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 FABP12A6NFH5 140 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 E7EUB6 86 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 CREBL2O60519 120 aaPredicted RBP12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 S1PR2O95136 353 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 IFNA6P05013 189 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 IGLL1P15814 213 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 DEFA6Q01524 100 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 STEAP1BQ6NZ63 245 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 SSX9Q7RTT3 188 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 TERB2Q8NHR7 220 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 MRGPRFQ96AM1 343 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 MS4A10Q96PG2 267 aa12.5□□□□□ -0.41
TSPAN4-218ENST00000529566 TRAV3A0A0B4J244 114 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 TEX22C9J3V5 150 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 H3BUA1 57 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 RAB3DO95716 219 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 APELAP0DMC3 54 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 NQO2P16083 231 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 MAS1LP35410 378 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 LPAR6P43657 344 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 FOXB2Q5VYV0 432 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 POC5Q8NA72 575 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 OR4A5Q8NH83 315 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 OR5B12Q96R08 314 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 AIFM2Q9BRQ8 373 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 SLA2Q9H6Q3 261 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 V9GYH0 126 aa12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-218ENST00000529566 ANKRD20A5PA0PJZ0 165 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 UPK2O00526 184 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 RBMXL2O75526 392 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 MYOD1P15172 320 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 RND3P61587 244 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 FAAP20Q6NZ36 180 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 TBC1D26Q86UD7 250 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 CCDC190Q86UF4 302 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 CADM3Q8N126 398 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 TTC9CQ8N5M4 171 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 OR11H1Q8NG94 326 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 SLC2A9Q9NRM0 540 aa12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 FAM212BQ9NTI7 297 aaPredicted RBP12.48□□□□□ -0.41
TSPAN4-218ENST00000529566 DPPA5A6NC42 116 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 MPPED1O15442 326 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 ACTL6BO94805 426 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 TRGV3P03979 118 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 FGF2P09038 288 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 LGALS1P09382 135 aaKnown RBP12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 OR9G9P0C7N8 305 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 HLA-GP17693 338 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 PI3P19957 117 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 TPPP2P59282 170 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 MEF2DQ14814 521 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 OR1N2Q8NGR9 330 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 ZNF486Q96H40 463 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 PHB2Q99623 299 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 TMEM140Q9NV12 185 aa12.47□□□□□ -0.41
TSPAN4-218ENST00000529566 HMX3A6NHT5 357 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 AKAIN1P0CW23 69 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 RPA2P15927 270 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 CD40LGP29965 261 aa12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-218ENST00000529566 ZNF45Q02386 682 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms