RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ASB13Q8WXK3 278 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 MAFIPQ8WZ33 124 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 RBPMSQ93062 196 aaKnown RBP6.62□□□□□ -1.35
SSBP3-212ENST00000528930 CMTM3Q96MX0 182 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 HSPB9Q9BQS6 159 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 CABLES2Q9BTV7 478 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 ATG5Q9H1Y0 275 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 GHITMQ9H3K2 345 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 ZC4H2Q9NQZ6 224 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 RDH8Q9NYR8 311 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF230Q9UIE0 474 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-212ENST00000528930 SCP2D1Q9UJQ7 156 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-212ENST00000528930 NUBP2Q9Y5Y2 271 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 TRBV6-7A0A0A0MS04 114 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 MPTX1A8MV57 137 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 I3L521 148 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 HSPA12AO43301 675 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 PRAF2O60831 178 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 HOXA1P49639 335 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-212ENST00000528930 LINC00205P59089 165 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 SRSF7Q16629 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF260Q3ZCT1 412 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 CDNFQ49AH0 187 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 PXDC1Q5TGL8 231 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 GLDNQ6ZMI3 551 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-212ENST00000528930 Q6ZS49 121 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 LAX1Q8IWV1 398 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 Q8N402 240 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 NPBQ8NG41 125 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 OR5AN1Q8NGI8 311 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 LGALS14Q8TCE9 139 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 RASL11BQ9BPW5 248 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 MED28Q9H204 178 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 RNF150Q9ULK6 438 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 GAB2Q9UQC2 676 aa6.61□□□□□ -1.35
SSBP3-212ENST00000528930 KMT2AQ03164 3969 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 A0A1W2PRX2 142 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 H0YJW9 148 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 AP4M1O00189 453 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 NDUFA3O95167 84 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 DIRAS3O95661 229 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 IGF1P05019 195 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 SULT1A3P0DMM9 295 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 SULT1A4P0DMN0 295 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 CFHR3Q02985 330 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 ARFRP1Q13795 201 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 KIR2DS1Q14954 304 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 ARL6IP1Q15041 203 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 MMDQ15546 238 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 C18orf65Q6ZTR6 163 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 HSD17B13Q7Z5P4 300 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-212ENST00000528930 COMMD7Q86VX2 200 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 FOXRED2Q8IWF2 684 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF383Q8NA42 475 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 SLC25A38Q96DW6 304 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 C5orf30Q96GV9 206 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF436Q9C0F3 470 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-212ENST00000528930 EDA2RQ9HAV5 297 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 IFT46Q9NQC8 304 aa6.6□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF107Q9UII5 783 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-212ENST00000528930 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 TMEM235A6NFC5 223 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 MFSD2BA6NFX1 497 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 OR5H14A6NHG9 310 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 CTDSPLO15194 276 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 NBR2O15453 112 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 SSX5O60225 188 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 HLA-DRB1P01911 266 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 DTYMKP23919 212 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 MC5RP33032 325 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 SCAND1P57086 179 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 RPL23AP62750 156 aaKnown RBP6.59□□□□□ -1.35
SSBP3-212ENST00000528930 SLC35B1P78383 322 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 DYRK1AQ13627 763 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 PNLIPRP3Q17RR3 467 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 C5orf64Q2M2E5 130 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 IDNKQ5T6J7 187 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 ETV3LQ6ZN32 361 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 COMMD1Q8N668 190 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 RNF152Q8N8N0 203 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 OR10J5Q8NHC4 309 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 SCPEP1Q9HB40 452 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 ZFP57Q9NU63 452 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 SDHAF2Q9NX18 166 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF580Q9UK33 172 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 SPATA2Q9UM82 520 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 ETV7Q9Y603 341 aa6.59□□□□□ -1.35
SSBP3-212ENST00000528930 NAP1L6A6NFF2 107 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 FCN1O00602 326 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 RRHO14718 337 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 B3GALNT1O75752 331 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 SCGNO76038 276 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 IGHG4P01861 327 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 IGKV1-16P04430 117 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 OR8U9P0C7N5 309 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 PF4V1P10720 104 aa6.58□□□□□ -1.36
SSBP3-212ENST00000528930 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
SSBP3-212ENST00000528930 PPIFP30405 207 aaKnown RBP6.58□□□□□ -1.36
SSBP3-212ENST00000528930 NUP62P37198 522 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms