RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PLXNB1O43157 2135 aa13.1□□□□□ -0.31
CAPN1-205ENST00000526954 C2CD3Q4AC94 2353 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 FCN1O00602 326 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 DUS4LO95620 317 aaKnown RBP13.09□□□□□ -0.31
CAPN1-205ENST00000526954 P0C879 139 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 RAB25P57735 213 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 RELBQ01201 579 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 PRSS8Q16651 343 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 TMEM268Q5VZI3 342 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 Q6ZSV7 163 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 SSX9Q7RTT3 188 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 ZNF695Q8IW36 515 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 C16orf95Q9H693 158 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 PRR13Q9NZ81 148 aa13.09□□□□□ -0.31
CAPN1-205ENST00000526954 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 DUXBA0A1W2PPF3 345 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 UPK2O00526 184 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-205ENST00000526954 PRAF2O60831 178 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 IGKV1-5P01602 117 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 IGHG2P01859 326 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 OXA1LQ15070 435 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 ANKRD55Q3KP44 614 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 ZNF562Q6V9R5 426 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 Q6ZS46 218 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 H2BFWTQ7Z2G1 175 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 MMD2Q8IY49 270 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 CASTOR1Q8WTX7 329 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 LSM10Q969L4 123 aaKnown RBP13.08□□□□□ -0.32
CAPN1-205ENST00000526954 ZNF430Q9H8G1 570 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-205ENST00000526954 SHPKQ9UHJ6 478 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 MMP24Q9Y5R2 645 aa13.08□□□□□ -0.32
CAPN1-205ENST00000526954 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-205ENST00000526954 DHFRP00374 187 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 HKR1P10072 659 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 MAS1LP35410 378 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 AKR1C2P52895 323 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 CX3CL1P78423 397 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 PJVKQ0ZLH3 352 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 FAM219AQ8IW50 185 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 SLC35G3Q8N808 338 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 OR52B4Q8NGK2 314 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 ZNF431Q8TF32 576 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-205ENST00000526954 MITD1Q8WV92 249 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 HSPB9Q9BQS6 159 aa13.07□□□□□ -0.32
CAPN1-205ENST00000526954 KCNAB3O43448 404 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 CA2P00918 260 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 VDAC1P21796 283 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 RPL8P62917 257 aaKnown RBP13.06□□□□□ -0.32
CAPN1-205ENST00000526954 SSBP2P81877 361 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-205ENST00000526954 C9orf152Q5JTZ5 239 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 MINDY2Q8NBR6 621 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 RRNAD1Q96FB5 475 aaKnown RBP13.06□□□□□ -0.32
CAPN1-205ENST00000526954 CLCC1Q96S66 551 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 PHB2Q99623 299 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 SEC22CQ9BRL7 303 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 OR51J1Q9H342 316 aa13.06□□□□□ -0.32
CAPN1-205ENST00000526954 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-205ENST00000526954 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 OR9G9P0C7N8 305 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 RIPPLY3P57055 190 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 SLC35E3Q7Z769 313 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-205ENST00000526954 OR4F5Q8NH21 305 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 OR2T6Q8NHC8 308 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 CHPT1Q8WUD6 406 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 TAF15Q92804 592 aaKnown RBP eCLIP13.05□□□□□ -0.32
CAPN1-205ENST00000526954 SERTAD4Q9NUC0 356 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 ZNF580Q9UK33 172 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 PRNDQ9UKY0 176 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
CAPN1-205ENST00000526954 TET2Q6N021 2002 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-205ENST00000526954 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 LINC01548A6NM66 108 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 DBX1A6NMT0 343 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 SNAPC5O75971 98 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 IGF1P05019 195 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 HLA-GP17693 338 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 COMPP49747 757 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-205ENST00000526954 CRIP2P52943 208 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-205ENST00000526954 FXYD3Q14802 87 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 KRTAP24-1Q3LI83 254 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 FOXRED2Q8IWF2 684 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 RNASE11Q8TAA1 199 aaKnown RBP13.04□□□□□ -0.32
CAPN1-205ENST00000526954 GPR146Q96CH1 333 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 TMEM14BQ9NUH8 114 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 FKBP11Q9NYL4 201 aa13.04□□□□□ -0.32
CAPN1-205ENST00000526954 A0A0B4J293 547 aa13.03□□□□□ -0.32
CAPN1-205ENST00000526954 A0A1B0GUS0 222 aa13.03□□□□□ -0.32
CAPN1-205ENST00000526954 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
CAPN1-205ENST00000526954 AP4M1O00189 453 aa13.03□□□□□ -0.32
CAPN1-205ENST00000526954 ACTL6BO94805 426 aa13.03□□□□□ -0.32
CAPN1-205ENST00000526954 CNIH1O95406 144 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms