RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 RASL12Q9NYN1 266 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 TAS2R8Q9NYW2 309 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 TAC3Q9UHF0 121 aa3.6□□□□□ -1.83
SKP1-213ENST00000524288 YTHDF2Q9Y5A9 579 aaKnown RBP3.6□□□□□ -1.83
SKP1-213ENST00000524288 IGKV1-27A0A075B6S5 117 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 TRAV14DV4A0A0A6YYC5 116 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 A0A0D9SG52 128 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 A0A0U1RQV1 116 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 A0A1W2PRF3 423 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 A0A1W2PRM7 423 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 RAB19A4D1S5 217 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 FAM183AA6NL82 134 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 F5H5P2 479 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 J3QLW9 94 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 SULT1C2O00338 296 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PIN1P1O15428 100 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 CCL16O15467 120 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 RBFOX2O43251 390 aaKnown RBP eCLIP3.59□□□□□ -1.83
SKP1-213ENST00000524288 FGF16O43320 207 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 S100A9P06702 114 aaKnown RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 DCNP07585 359 aaKnown RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 HLA-GP17693 338 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PAX6P26367 422 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PSMB5P28074 263 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 AGTR1P30556 359 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PYCR1P32322 319 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 MPIP34949 423 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 CBX5P45973 191 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 H2BFSP57053 126 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 TAS2R20P59543 309 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 STX4Q12846 297 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 BTN1A1Q13410 526 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 OR1Q1Q15612 314 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 WDR86Q86TI4 376 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 LRRC25Q8N386 305 aaPredicted RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 KCNRGQ8N5I3 272 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PXT1Q8NFP0 134 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PFN4Q8NHR9 129 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 RERGQ96A58 199 aaPredicted RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 TCEAL4Q96EI5 215 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 SDF2Q99470 211 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 GABRG3Q99928 467 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 ZNF442Q9H7R0 627 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 CACYBPQ9HB71 228 aaKnown RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 TMEM100Q9NV29 134 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 OR5V1Q9UGF6 321 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 CARHSP1Q9Y2V2 147 aaKnown RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 MED31Q9Y3C7 131 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 PCYT1BQ9Y5K3 369 aaPredicted RBP3.59□□□□□ -1.83
SKP1-213ENST00000524288 OR51B2Q9Y5P1 312 aa3.59□□□□□ -1.83
SKP1-213ENST00000524288 A0A0A6YYH2 397 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 A6NIN4 97 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 A6NJ64 397 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 ZNF98A6NK75 572 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR5K4A6NMS3 321 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 FAM25EA8MYX2 175 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 YIF1AO95070 293 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 NDUFB2O95178 105 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 IFNA4P05014 189 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 GP1BAP07359 652 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 AKAIN1P0CW23 69 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 ZNF35P13682 527 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 CDK2P24941 298 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 LOXP28300 417 aaPredicted RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 PEBP1P30086 187 aaKnown RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 CCR2P41597 374 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 TAS2R31P59538 309 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR2B8PP59922 312 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 DCDP81605 110 aaKnown RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR2F1Q13607 317 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 EBI3Q14213 229 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 Q499Y3 187 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 TMEM69Q5SWH9 247 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 CLVS2Q5SYC1 327 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 MRPL2Q5T653 305 aaKnown RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 C9orf64Q5T6V5 341 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 LINC01590Q5TEZ4 76 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 ALKAL2Q6UX46 152 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 NDUFAF7Q7L592 441 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 SAXO1Q8IYX7 474 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 CDRT4Q8N9R6 151 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR4C16Q8NGL9 310 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR5M1Q8NGP8 315 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR13C9Q8NGT0 318 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR9A2Q8NGT5 310 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 OR4C6Q8NH72 309 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 STOML3Q8TAV4 291 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 RXFP4Q8TDU9 374 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 STARD4Q96DR4 205 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 S100A16Q96FQ6 103 aaKnown RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 ZFP3Q96NJ6 502 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 PRAP1Q96NZ9 151 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 TBX5Q99593 518 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 C1QTNF6Q9BXI9 259 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 SLC19A3Q9BZV2 496 aa3.58□□□□□ -1.84
SKP1-213ENST00000524288 NKX6-2Q9C056 277 aaPredicted RBP3.58□□□□□ -1.84
SKP1-213ENST00000524288 ARL6Q9H0F7 186 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms