RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PUSL1Q8N0Z8 303 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 MMP26Q9NRE1 261 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 ZNF257Q9Y2Q1 563 aa12.19□□□□□ -0.46
TRAPPC9-205ENST00000518839 KBTBD11O94819 623 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 TMEM50AO95807 157 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 DLX1P56177 255 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 OR2B8PP59922 312 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 HSPE1P61604 102 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 HBG1P69891 147 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 HBG2P69892 147 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 ZNF266Q14584 549 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 DEFB113Q30KQ7 82 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 STPG2Q8N412 459 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 MBD6Q96DN6 1003 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
TRAPPC9-205ENST00000518839 A0A1W2PPI3 338 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 RNASEK-C17orf49H0YIS7 233 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 DFFBO76075 338 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 CD1BP29016 333 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 NHLH2Q02577 135 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 PAX8Q06710 450 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 KLRD1Q13241 179 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 TEX45Q8NA69 505 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 OR1S2Q8NGQ3 325 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 OR5B3Q8NH48 314 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 TMEM167AQ8TBQ9 72 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 ENY2Q9NPA8 101 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 TCF19Q9Y242 345 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 LRBAP50851 2863 aa12.17□□□□□ -0.46
TRAPPC9-205ENST00000518839 TET2Q6N021 2002 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 LRRK2Q5S007 2527 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 B4DSR2 109 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 GATA3P23771 443 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 HTR2BP41595 481 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 HABP2Q14520 560 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 CLLU1Q5K131 121 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 SPANXN5Q5MJ07 72 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 RPL7L1Q6DKI1 246 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 ALKAL2Q6UX46 152 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 TMEM14EPQ6UXP3 125 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 LRRC20Q8TCA0 184 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 SMIM3Q9BZL3 60 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
TRAPPC9-205ENST00000518839 TRAV3A0A0B4J244 114 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 TRAV20A0A0B4J274 112 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 H3BP45 60 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 CST7O76096 145 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 MSMBP08118 114 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 DYNLT3P51808 116 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 KRTAP10-9P60411 292 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 ATP6V1FQ16864 119 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 OR5C1Q8NGR4 320 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 MALSU1Q96EH3 234 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 ARV1Q9H2C2 271 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 SLC25A32Q9H2D1 315 aa12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-205ENST00000518839 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 MAS1LP35410 378 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 ATP5IP56385 69 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 PRCDQ00LT1 54 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 LOXL1Q08397 574 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 MMD2Q8IY49 270 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 OR1L8Q8NGR8 309 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 BSCL2Q96G97 398 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 ATP5SQ99766 215 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 PLEKHA3Q9HB20 300 aa12.14□□□□□ -0.47
TRAPPC9-205ENST00000518839 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 IGHV3-72A0A0B4J1Y9 119 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 A0A1W2PN81 502 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 TIMM23O14925 209 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 VENTXO95231 258 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 IFNA5P01569 189 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 CHRNA7P36544 502 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 F2RL1P55085 397 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 RAB11AP62491 216 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 CLINT1Q14677 625 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 LHFPL4Q7Z7J7 247 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 MRPL41Q8IXM3 137 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 LILRB2Q8N423 598 aa12.13□□□□□ -0.47
TRAPPC9-205ENST00000518839 TMEM217Q8N7C4 229 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms