RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SELENOIQ9C0D9 397 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 OR51E2Q9H255 320 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 ZNF696Q9H7X3 374 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RHOFQ9HBH0 211 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 C19orf12Q9NSK7 152 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 TXNL4BQ9NX01 149 aaKnown RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 NDUFB11Q9NX14 153 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RPUSD1Q9UJJ7 312 aaKnown RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 ZNF222Q9UK12 451 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 INSIG2Q9Y5U4 225 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 V9GY05 133 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 ARFGEF3Q5TH69 2177 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 SVEP1Q4LDE5 3571 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 CSPG4Q6UVK1 2322 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 MEIKINA0A087WXM9 373 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 TRGV10A0A0A0MS01 117 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 TRAV1-2A0A0B4J238 106 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 hADV38S2A0JD32 116 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 hDV102S1A0JD36 115 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 A8MXK9 166 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 MCRIP1C9JLW8 97 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 CLDN34H7C241 214 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 GOSR2O14653 212 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 GEMIN2O14893 280 aaKnown RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 PPP1R2P9O14990 202 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 GATCO43716 136 aaKnown RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 FAM157CP0CG43 387 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 UBBP0CG47 229 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RAB3BP20337 219 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 GADD45AP24522 165 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RANBP1P43487 201 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 ALDH3B2P48448 385 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 DLX1P56177 255 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 CLDN12P56749 244 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RBM11P57052 281 aaKnown RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 OR10A3P58181 314 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 MXD1Q05195 221 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 TAF9Q16594 264 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 SYT6Q5T7P8 510 aaPredicted RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 ELP2Q6IA86 826 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 OR10K2Q6IF99 312 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 Q6P435 159 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RBMS3Q6XE24 437 aaKnown RBP2.22□□□□□ -2.05
SKP1-204ENST00000517691 BRD3OSQ6XYD6 125 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 OR2W3Q7Z3T1 314 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 VMO1Q7Z5L0 202 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 SUMF2Q8NBJ7 301 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 CHST4Q8NCG5 386 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 LY6G5BQ8NDX9 201 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 OR51D1Q8NGF3 324 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RAB3CQ96E17 227 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 KCTD7Q96MP8 289 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 BARHL1Q9BZE3 327 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 CST11Q9H112 138 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 RNF167Q9H6Y7 350 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 ZNF581Q9P0T4 197 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 OPN4Q9UHM6 478 aa2.22□□□□□ -2.05
SKP1-204ENST00000517691 HIVEP2P31629 2446 aa2.21□□□□□ -2.05
SKP1-204ENST00000517691 ZFHX3Q15911 3703 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TRAV39A0A0B4J263 110 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TRAV40A0A0B4J280 105 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TRBV7-9A0A0J9YWB2 115 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 ODAMA1E959 279 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 FAM231BA6NCW3 169 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 IFITM5A6NNB3 132 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 SNURFLB1AK76 121 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 M0R1W7 72 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 SLC17A2O00624 439 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 CCSO14618 274 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 SLC22A1O15245 554 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 ZNF737O75373 536 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TCRBP04435 133 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TFAP2AP05549 437 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 ZNF728P0DKX0 622 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 IGHV4-38-2P0DP08 117 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 SLC2A2P11168 524 aaPredicted RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 MYOD1P15172 320 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 CCL3L1P16619 93 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 FUT3P21217 361 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 COX7A1P24310 79 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 BLVRBP30043 206 aaPredicted RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 SDC2P34741 201 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 GLP1RP43220 463 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 SEC61BP60468 96 aaKnown RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 MEF2CQ06413 473 aaPredicted RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 KLRD1Q13241 179 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 DYNC1I2Q13409 638 aaKnown RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 LTC4SQ16873 150 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 TIMM50Q3ZCQ8 353 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 C1orf100Q5SVJ3 147 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 RUSC1-AS1Q66K80 236 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 CD200R1LQ6Q8B3 271 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 ZNF782Q6ZMW2 699 aaPredicted RBP2.21□□□□□ -2.06
SKP1-204ENST00000517691 LINC00596Q86U02 117 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 PNKDQ8N490 385 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 KIR3DL3Q8N743 410 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 MAPKAPK5-AS1Q8N8E1 139 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 NEXN-AS1Q8NBZ9 246 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 ZNF738Q8NE65 137 aa2.21□□□□□ -2.06
SKP1-204ENST00000517691 OR10A7Q8NGE5 316 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms