RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 SELENOHQ8IZQ5 122 aaKnown RBP5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 C5orf56Q8N8D9 126 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 TMEM167AQ8TBQ9 72 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 CHPT1Q8WUD6 406 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 MITD1Q8WV92 249 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 LSM10Q969L4 123 aaKnown RBP5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 DUX5Q96PT3 197 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 PHB2Q99623 299 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 RANBP3Q9H6Z4 567 aaPredicted RBP5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 BEX1Q9HBH7 125 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 BET1LQ9NYM9 111 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 SIGLEC9Q9Y336 463 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 MMP24Q9Y5R2 645 aa5.63□□□□□ -1.51
SCARNA6-201ENST00000515982 FAM181BA6NEQ2 426 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 MARCH11A6NNE9 402 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 UPK2O00526 184 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 KCNAB3O43448 404 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 CHST1O43916 411 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 CNIH1O95406 144 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 HLA-DRB1P01911 266 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 IL6RP08887 468 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 FGF2P09038 288 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 SAA1P0DJI8 122 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 SPNP16150 400 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 CNTFRP26992 372 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 OR4A47Q6IF82 309 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 ZNF562Q6V9R5 426 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 SSX9Q7RTT3 188 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 PUSL1Q8N0Z8 303 aaKnown RBP5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 C12orf45Q8N5I9 185 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 FAM71E2Q8N5Q1 922 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 OR4A16Q8NH70 328 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 SEC22AQ96IW7 307 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 FBXL15Q9H469 300 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 TMEM140Q9NV12 185 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 PRNDQ9UKY0 176 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 TMED3Q9Y3Q3 217 aa5.62□□□□□ -1.51
SCARNA6-201ENST00000515982 ANK3Q12955 4377 aaKnown RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 A0A1B0GU03 582 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 RBMXL2O75526 392 aaKnown RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 TSPAN9O75954 239 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 KBTBD11O94819 623 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 IGKV1-39P01597 117 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 IGKV1-5P01602 117 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 IGHG2P01859 326 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 IGKV1D-39P04432 117 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 AMY1AP04745 511 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 HOXB5P09067 269 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 SLC25A6P12236 298 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 HLA-GP17693 338 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 RPL8P62917 257 aaKnown RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 BLCAPP62952 87 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 TMEM267Q0VDI3 215 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 PRSS8Q16651 343 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 TATDN3Q17R31 274 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 ANKRD55Q3KP44 614 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 FBLN7Q53RD9 439 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 ARSJQ5FYB0 599 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 C9orf152Q5JTZ5 239 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 THOC7Q6I9Y2 204 aaKnown RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 LYZL2Q7Z4W2 148 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 FOXRED2Q8IWF2 684 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 MRPL41Q8IXM3 137 aaKnown RBP5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 VKORC1L1Q8N0U8 176 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 SLC35G3Q8N808 338 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 UXS1Q8NBZ7 420 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 OR52B4Q8NGK2 314 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 OR1L8Q8NGR8 309 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 OR4F5Q8NH21 305 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 OR2T6Q8NHC8 308 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 LHFPL5Q8TAF8 219 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 TMEM158Q8WZ71 300 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 GPR146Q96CH1 333 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 CLCC1Q96S66 551 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 SPIN2AQ99865 258 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 SPIN2BQ9BPZ2 258 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 SEC22CQ9BRL7 303 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 COMMD5Q9GZQ3 224 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 OR51J1Q9H342 316 aa5.61□□□□□ -1.51
SCARNA6-201ENST00000515982 IGHV7-81A0A0B4J1V7 117 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 A0A1B0GUS0 222 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 C7orf66A4D0T2 115 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 AP4M1O00189 453 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 FCN1O00602 326 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 SSNA1O43805 119 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 NDUFA7O95182 113 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 CA2P00918 260 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 P0C879 139 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 SULT1A3P0DMM9 295 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 SULT1A4P0DMN0 295 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 HKR1P10072 659 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 CX3CL1P78423 397 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 SMCO1Q147U7 214 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 FXYD3Q14802 87 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 TNXAQ16473 311 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 GGNBP1Q5YKI7 109 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 SLC35E3Q7Z769 313 aa5.6□□□□□ -1.51
SCARNA6-201ENST00000515982 ZNF429Q86V71 674 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms