RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 KBTBD11O94819 623 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 IGKV1-5P01602 117 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 HLA-DRB1P01911 266 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 IL6RP08887 468 aaPredicted RBP16.67■□□□□ 0.26
LSM6-207ENST00000515311 FGF2P09038 288 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 PLGLAQ15195 96 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 SSX9Q7RTT3 188 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 PPP1R27Q86WC6 154 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 OR52B4Q8NGK2 314 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 TMEM167AQ8TBQ9 72 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 RANBP3Q9H6Z4 567 aaPredicted RBP16.67■□□□□ 0.26
LSM6-207ENST00000515311 TMEM140Q9NV12 185 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 SHPKQ9UHJ6 478 aa16.67■□□□□ 0.26
LSM6-207ENST00000515311 SNRPGP15A8MWD9 76 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 P0C879 139 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 AKR1C2P52895 323 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 LIN54Q6MZP7 749 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 H2BFWTQ7Z2G1 175 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 FAM219AQ8IW50 185 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 SLC35G3Q8N808 338 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 LSM10Q969L4 123 aaKnown RBP16.66■□□□□ 0.26
LSM6-207ENST00000515311 RRNAD1Q96FB5 475 aaKnown RBP16.66■□□□□ 0.26
LSM6-207ENST00000515311 PHB2Q99623 299 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 TPSG1Q9NRR2 321 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 MMP24Q9Y5R2 645 aa16.66■□□□□ 0.26
LSM6-207ENST00000515311 PRSS8Q16651 343 aa16.65■□□□□ 0.26
LSM6-207ENST00000515311 C7orf66A4D0T2 115 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 UPK2O00526 184 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 CRYBA1P05813 215 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 VDAC1P21796 283 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 BLCAPP62952 87 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 TATDN3Q17R31 274 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 MRGPRG-AS1Q2M3A8 158 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 LYZL2Q7Z4W2 148 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 MMD2Q8IY49 270 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 RNASE11Q8TAA1 199 aaKnown RBP16.64■□□□□ 0.25
LSM6-207ENST00000515311 PRSS22Q9GZN4 317 aa16.64■□□□□ 0.25
LSM6-207ENST00000515311 ZNF430Q9H8G1 570 aaPredicted RBP16.64■□□□□ 0.25
LSM6-207ENST00000515311 A0A0B4J293 547 aa16.63■□□□□ 0.25
LSM6-207ENST00000515311 NMSQ5H8A3 153 aa16.63■□□□□ 0.25
LSM6-207ENST00000515311 Q8N2B8 174 aa16.63■□□□□ 0.25
LSM6-207ENST00000515311 TMED3Q9Y3Q3 217 aa16.63■□□□□ 0.25
LSM6-207ENST00000515311 TNCP24821 2201 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 C2CD3Q4AC94 2353 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 DBX1A6NMT0 343 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 FCN1O00602 326 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 SNAPC5O75971 98 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 MAS1LP35410 378 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 RPL8P62917 257 aaKnown RBP16.62■□□□□ 0.25
LSM6-207ENST00000515311 PJVKQ0ZLH3 352 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 ZNF562Q6V9R5 426 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 C12orf45Q8N5I9 185 aaPredicted RBP16.62■□□□□ 0.25
LSM6-207ENST00000515311 ZNF702PQ9H963 129 aa16.62■□□□□ 0.25
LSM6-207ENST00000515311 A0A0G2JRQ6 117 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 KCNAB3O43448 404 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 TSPAN9O75954 239 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 NDUFA7O95182 113 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 CA2P00918 260 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 IGHG2P01859 326 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 OR9G9P0C7N8 305 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 RELBQ01201 579 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 PRIMA1Q86XR5 153 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 CLCC1Q96S66 551 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 HSPB9Q9BQS6 159 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 PRNDQ9UKY0 176 aa16.61■□□□□ 0.25
LSM6-207ENST00000515311 PLXNB1O43157 2135 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 IGHV7-81A0A0B4J1V7 117 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 TRAV3A0A0B4J244 114 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 SH2D7A6NKC9 451 aaPredicted RBP16.6■□□□□ 0.25
LSM6-207ENST00000515311 C15orf61A6NNL5 157 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 ACTL6BO94805 426 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 HLA-GP17693 338 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 COMPP49747 757 aaPredicted RBP16.6■□□□□ 0.25
LSM6-207ENST00000515311 CX3CL1P78423 397 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 SSBP2P81877 361 aaPredicted RBP16.6■□□□□ 0.25
LSM6-207ENST00000515311 Q6ZSV7 163 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 FOXRED2Q8IWF2 684 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 TMEM14BQ9NUH8 114 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 COA4Q9NYJ1 87 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 FKBP11Q9NYL4 201 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 ALG5Q9Y673 324 aa16.6■□□□□ 0.25
LSM6-207ENST00000515311 IFNA21P01568 189 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 HOXB5P09067 269 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 SLC25A6P12236 298 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 SRSF2Q01130 221 aaKnown RBP16.59■□□□□ 0.25
LSM6-207ENST00000515311 IZUMO4Q1ZYL8 232 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 C9orf152Q5JTZ5 239 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 GGNBP1Q5YKI7 109 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 Q6ZS46 218 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 SLC35E3Q7Z769 313 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 OR4A16Q8NH70 328 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 GPR146Q96CH1 333 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 OR51J1Q9H342 316 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 C16orf95Q9H693 158 aa16.59■□□□□ 0.25
LSM6-207ENST00000515311 FOXA2Q9Y261 457 aaPredicted RBP16.59■□□□□ 0.25
LSM6-207ENST00000515311 A0A1B0GU03 582 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 ADAP1O75689 374 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 CNIH1O95406 144 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 SULT1A3P0DMM9 295 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 SULT1A4P0DMN0 295 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms