RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TRBV9A0A0B4J1U6 114 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 TRAV34A0A0B4J273 112 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 TEX13DA0A0J9YY54 714 aaPredicted RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 H3BN98 237 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 NME4O00746 187 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 RAB29O14966 203 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SLC31A2O15432 143 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SNX3O60493 162 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SULT1C4O75897 302 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 CCNB2O95067 398 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 CA2P00918 260 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 TRBV12-3P01733 135 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 ISG15P05161 165 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 KRT8P05787 483 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 RBMY1CP0DJD4 496 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 GALP22466 123 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 NPY1RP25929 384 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 HLA-DMBP28068 263 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 OR3A3P47888 321 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 CXCR4P61073 352 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 MAGOHP61326 146 aaKnown RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 TMED1Q13445 227 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 GINS1Q14691 196 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 KISS1Q15726 138 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 TMEM41BQ5BJD5 291 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 NHLRC3Q5JS37 347 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SLC25A30Q5SVS4 291 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 C6orf183Q5T699 404 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 LIPKQ5VXJ0 399 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 LAMTOR1Q6IAA8 161 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 HACD2Q6Y1H2 254 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 ZNF497Q6ZNH5 498 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SPAG16Q8N0X2 631 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 STX19Q8N4C7 294 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SUMF2Q8NBJ7 301 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 AQP11Q8NBQ7 271 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 UXS1Q8NBZ7 420 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 NECAP1Q8NC96 275 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 FGGYQ96C11 551 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 TSNAXQ99598 290 aaKnown RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 APOL4Q9BPW4 351 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 KCTD14Q9BQ13 255 aaPredicted RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 PARP12Q9H0J9 701 aaKnown RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 SPACA1Q9HBV2 294 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 OR2S2Q9NQN1 319 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 ARMC1Q9NVT9 282 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 CLN6Q9NWW5 311 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 ABCD2Q9UBJ2 740 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 METTL1Q9UBP6 276 aaKnown RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 MLXQ9UH92 298 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 ING4Q9UNL4 249 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 EXOSC1Q9Y3B2 195 aaKnown RBP2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 WASHC3Q9Y3C0 194 aa2.61□□□□□ -1.99
PDLIM5-218ENST00000513341 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 DEFB131BA0A096LNP1 70 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 IGHV3-43A0A0B4J1X8 118 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 TRAV39A0A0B4J263 110 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ZNF320A2RRD8 509 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 TMEM213A2RRL7 107 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 OR4C46A6NHA9 309 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 METTL15A6NJ78 407 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 MCRIP1C9JLW8 97 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ZNF670-ZNF695F2Z2N8 137 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 H7C2Y5 167 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ITGB1BP1O14713 200 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 MRPS14O60783 128 aaKnown RBP2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ZNF780AO75290 641 aaPredicted RBP2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 GPX5O75715 221 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 HBZP02008 142 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 GLAP06280 429 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 OR9G9P0C7N8 305 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CT45A6P0DMU7 189 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CT45A5P0DMU8 189 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CT45A7P0DMV0 189 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 IGHV3-43DP0DP04 118 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 MIFP14174 115 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 PSMB6P28072 239 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 FCGR2BP31994 310 aaPredicted RBP2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CAPGP40121 348 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 MAGEA2P43356 314 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 VSNL1P62760 191 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CDK5Q00535 292 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 PNRC1Q12796 327 aaPredicted RBP2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 TMEM187Q14656 261 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ZNF674Q2M3X9 581 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 MPV17LQ2QL34 196 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 SYT6Q5T7P8 510 aaPredicted RBP2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ZNF691Q5VV52 312 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 PLEKHG7Q6ZR37 379 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 SERPINA12Q8IW75 414 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 UBE2DNLQ8IWF7 75 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 TCEANCQ8N8B7 351 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 OR9Q2Q8NGE9 314 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 OR5D14Q8NGL3 314 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 KCNG3Q8TAE7 436 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 TLCD1Q96CP7 247 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 ADAT3Q96EY9 351 aaPredicted RBP2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CLCC1Q96S66 551 aa2.6□□□□□ -1.99
PDLIM5-218ENST00000513341 CNN2Q99439 309 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms