RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 BET1LQ9NYM9 111 aa6.02□□□□□ -1.45
HMGXB3-204ENST00000513318 METTL1Q9UBP6 276 aaKnown RBP6.02□□□□□ -1.45
HMGXB3-204ENST00000513318 KCNIP3Q9Y2W7 256 aa6.02□□□□□ -1.45
HMGXB3-204ENST00000513318 SIGLEC9Q9Y336 463 aa6.02□□□□□ -1.45
HMGXB3-204ENST00000513318 NUBP2Q9Y5Y2 271 aa6.02□□□□□ -1.45
HMGXB3-204ENST00000513318 TRAV6A0A075B6T7 132 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 A0A1B0GUS0 222 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 SRRM4A7MD48 611 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 ATG12O94817 140 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 KBTBD11O94819 623 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 OR2A4O95047 310 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 PTTG1O95997 202 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 IGHG2P01859 326 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 HLA-AP01891 365 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 CRYGBP07316 175 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 FGF2P09038 288 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 MECP2P51608 486 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 AKR1C2P52895 323 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 BLCAPP62952 87 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 SUPT4H1P63272 117 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 SRPXP78539 464 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 TRIM16LQ309B1 348 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 C9orf152Q5JTZ5 239 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 OR4A47Q6IF82 309 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 LIN54Q6MZP7 749 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 PLET1Q6UQ28 207 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 SSX9Q7RTT3 188 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 SLC35E3Q7Z769 313 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 SLC25A42Q86VD7 318 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 MMD2Q8IY49 270 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 PUSL1Q8N0Z8 303 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 CADM3Q8N126 398 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 DUSP18Q8NEJ0 188 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 DMBX1Q8NFW5 382 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 OR4A5Q8NH83 315 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM167AQ8TBQ9 72 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 GLYATL2Q8WU03 294 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM158Q8WZ71 300 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 RBPMSQ93062 196 aaKnown RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 IL22RA2Q969J5 263 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 OR2A7Q96R45 310 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 ALX4Q9H161 411 aaPredicted RBP6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 C16orf95Q9H693 158 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 FLVCR2Q9UPI3 526 aa6.01□□□□□ -1.45
HMGXB3-204ENST00000513318 IGHV7-81A0A0B4J1V7 117 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 DUXBA0A1W2PPF3 345 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM89A2RUT3 159 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 SH2D7A6NKC9 451 aaPredicted RBP6□□□□□ -1.45
HMGXB3-204ENST00000513318 AP4M1O00189 453 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 SFT2D2O95562 160 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 CDS2O95674 445 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 CA2P00918 260 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 KRASP01116 189 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 IGKV1-39P01597 117 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 IGKV1D-39P04432 117 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 OR4E1P0C645 316 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 VAMP1P23763 118 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 G6PCP35575 357 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 VDAC2P45880 294 aaPredicted RBP6□□□□□ -1.45
HMGXB3-204ENST00000513318 ID3Q02535 119 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 FOXL1Q12952 345 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 PPP1R1AQ13522 171 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM187Q14656 261 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 SP6Q3SY56 376 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM268Q5VZI3 342 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 NRARPQ7Z6K4 114 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 LYG2Q86SG7 212 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 ZNF695Q8IW36 515 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 FAM219AQ8IW50 185 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 FOXRED2Q8IWF2 684 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 VKORC1L1Q8N0U8 176 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 RNASE11Q8TAA1 199 aaKnown RBP6□□□□□ -1.45
HMGXB3-204ENST00000513318 SEC22AQ96IW7 307 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM56Q96MV1 263 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 FANCD2OSQ96PS1 177 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 HSPB9Q9BQS6 159 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 C19orf24Q9BVV8 132 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 ZNF430Q9H8G1 570 aaPredicted RBP6□□□□□ -1.45
HMGXB3-204ENST00000513318 BEX1Q9HBH7 125 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM140Q9NV12 185 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 ZNF580Q9UK33 172 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 MMP24Q9Y5R2 645 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 TMEM56-RWDD3S4R434 201 aa6□□□□□ -1.45
HMGXB3-204ENST00000513318 A0A0B4J2A0 478 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 C9orf170A2RU37 121 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 CLPSL1A2RUU4 121 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 ATP6V0E1O15342 81 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 ACTL6BO94805 426 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 IL6RP08887 468 aaPredicted RBP5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 ANXA7P20073 488 aaKnown RBP5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 VDAC1P21796 283 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 MAS1LP35410 378 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 CRIP2P52943 208 aaPredicted RBP5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 RAB25P57735 213 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 RPL8P62917 257 aaKnown RBP5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 NDPQ00604 133 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 PJVKQ0ZLH3 352 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 DHRS2Q13268 280 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 TNXAQ16473 311 aa5.99□□□□□ -1.45
HMGXB3-204ENST00000513318 PRSS8Q16651 343 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms