RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 DBX1A6NMT0 343 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 G3V318 75 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 ATP6V0E1O15342 81 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 SOX15O60248 233 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 KBTBD11O94819 623 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 CDS2O95674 445 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 IGF1P05019 195 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 OR9G9P0C7N8 305 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 AKR1C4P17516 323 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 G6PCP35575 357 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 VDAC2P45880 294 aaPredicted RBP8.12□□□□□ -1.11
PTPN20-227ENST00000513159 CRIP2P52943 208 aaPredicted RBP8.12□□□□□ -1.11
PTPN20-227ENST00000513159 RBMS2Q15434 407 aaKnown RBP8.12□□□□□ -1.11
PTPN20-227ENST00000513159 ZNF562Q6V9R5 426 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 KLHDC1Q8N7A1 406 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 R3HDM4Q96D70 268 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 FAM103A1Q9BTL3 118 aaKnown RBP8.12□□□□□ -1.11
PTPN20-227ENST00000513159 TMEM222Q9H0R3 208 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 TMEM140Q9NV12 185 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 BET1LQ9NYM9 111 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 NUBP2Q9Y5Y2 271 aa8.12□□□□□ -1.11
PTPN20-227ENST00000513159 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 A0A1B0GUS0 222 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 MARCH11A6NNE9 402 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 UPK2O00526 184 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 OR2A4O95047 310 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 HRASP01112 189 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 KRASP01116 189 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 TCRBP04435 133 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 NQO2P16083 231 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
PTPN20-227ENST00000513159 CBX3Q13185 183 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 PPP1R1AQ13522 171 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 ANKRD55Q3KP44 614 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 VMA21Q3ZAQ7 101 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 Q6ZRM9 215 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 TMED4Q7Z7H5 227 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 ZNF329Q86UD4 541 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 SLC25A42Q86VD7 318 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 SELENOHQ8IZQ5 122 aaKnown RBP8.11□□□□□ -1.11
PTPN20-227ENST00000513159 CADM3Q8N126 398 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 STPG2Q8N412 459 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 CCDC71LQ8N9Z2 235 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 POC5Q8NA72 575 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 TMEM56Q96MV1 263 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 OR2A7Q96R45 310 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 ZNF580Q9UK33 172 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 NSG2Q9Y328 171 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 WSB1Q9Y6I7 421 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 TMEM56-RWDD3S4R434 201 aa8.11□□□□□ -1.11
PTPN20-227ENST00000513159 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 CENPXA8MT69 81 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 AP4M1O00189 453 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 CD28P10747 220 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 SPNP16150 400 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 ANXA7P20073 488 aaKnown RBP8.1□□□□□ -1.11
PTPN20-227ENST00000513159 FXYD3Q14802 87 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 PLGLAQ15195 96 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 TMEM128Q5BJH2 165 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 LCNL1Q6ZST4 164 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 NRARPQ7Z6K4 114 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 CENPSQ8N2Z9 138 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 C11orf44Q8N8P7 122 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 SGMS2Q8NHU3 365 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 SCGB3A2Q96PL1 93 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 CITED1Q99966 193 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 ZNF747Q9BV97 191 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 C20orf85Q9H1P6 137 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 PARP11Q9NR21 331 aa8.1□□□□□ -1.11
PTPN20-227ENST00000513159 TRAV6A0A075B6T7 132 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 A0A0B4J293 547 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 TEX22C9J3V5 150 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 KCNAB3O43448 404 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 RBMXL2O75526 392 aaKnown RBP8.09□□□□□ -1.11
PTPN20-227ENST00000513159 S100GP29377 79 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 MECP2P51608 486 aaKnown RBP8.09□□□□□ -1.11
PTPN20-227ENST00000513159 GNB1P62873 340 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 KIAA0141Q14154 515 aaPredicted RBP8.09□□□□□ -1.11
PTPN20-227ENST00000513159 TNXAQ16473 311 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 SGPP2Q8IWX5 399 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 MMD2Q8IY49 270 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 MINDY2Q8NBR6 621 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 DUSP18Q8NEJ0 188 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 LFNGQ8NES3 379 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 DMBX1Q8NFW5 382 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 OR5AU1Q8NGC0 362 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 GRPEL2Q8TAA5 225 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 SRSF12Q8WXF0 261 aaKnown RBP8.09□□□□□ -1.11
PTPN20-227ENST00000513159 ARPC1AQ92747 370 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 TSC22D3Q99576 134 aa8.09□□□□□ -1.11
PTPN20-227ENST00000513159 TRAV41A0A0B4J266 112 aa8.08□□□□□ -1.12
PTPN20-227ENST00000513159 TEX50A0A1B0GTY4 177 aa8.08□□□□□ -1.12
PTPN20-227ENST00000513159 C9orf170A2RU37 121 aa8.08□□□□□ -1.12
PTPN20-227ENST00000513159 PSMB11A5LHX3 300 aa8.08□□□□□ -1.12
PTPN20-227ENST00000513159 HMX3A6NHT5 357 aa8.08□□□□□ -1.12
PTPN20-227ENST00000513159 MSGN1A6NI15 193 aa8.08□□□□□ -1.12
PTPN20-227ENST00000513159 B3GALNT1O75752 331 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms