RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NPIPB5A8MRT5 1133 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 RGS10O43665 173 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 TUSC2O75896 110 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 REG1AP05451 166 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 PTHLHP12272 177 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 RAB6AP20340 208 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 CBX3Q13185 183 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 ARFRP1Q13795 201 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 TRAM1Q15629 374 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 CDNFQ49AH0 187 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 ZNF414Q96IQ9 312 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 FYTTD1Q96QD9 318 aaKnown RBP11.85□□□□□ -0.51
RAB40C-202ENST00000509637 DCUN1D5Q9BTE7 237 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
RAB40C-202ENST00000509637 OR2W1Q9Y3N9 320 aa11.85□□□□□ -0.51
RAB40C-202ENST00000509637 TRAV3A0A0B4J244 114 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 KBTBD11O94819 623 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 CTRB1P17538 263 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 PSMB6P28072 239 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 ARL3P36405 182 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 RPL27AP46776 148 aaKnown RBP11.84□□□□□ -0.51
RAB40C-202ENST00000509637 CTRB2Q6GPI1 263 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 KCTD9Q7L273 389 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 ACOT13Q9NPJ3 140 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 TPRKBQ9Y3C4 175 aa11.84□□□□□ -0.51
RAB40C-202ENST00000509637 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 IGLV11-55A0A075B6I3 123 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 A8MWP6 167 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 S1PR2O95136 353 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 DTYMKP23919 212 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 PSMA1P25786 263 aaKnown RBP11.83□□□□□ -0.52
RAB40C-202ENST00000509637 MRPS15P82914 257 aaKnown RBP11.83□□□□□ -0.52
RAB40C-202ENST00000509637 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
RAB40C-202ENST00000509637 BTNL8Q6UX41 500 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 SSX9Q7RTT3 188 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 PRSS48Q7RTY5 328 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 MFSD4AQ8N468 514 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 OR2A7Q96R45 310 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 GGTLC1Q9BX51 225 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 CCDC90BQ9GZT6 254 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 SPATA2Q9UM82 520 aa11.83□□□□□ -0.52
RAB40C-202ENST00000509637 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 TMEM235A6NFC5 223 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 ERICH4A6NGS2 130 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 ACTL6BO94805 426 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 CLEC3BP05452 202 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 GADD45AP24522 165 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 PMS2P11Q13670 270 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 ATG5Q9H1Y0 275 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 TAS2R8Q9NYW2 309 aa11.82□□□□□ -0.52
RAB40C-202ENST00000509637 TRDV1A0A1B0GX56 115 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 LY6G6CO95867 125 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 RAB3BP20337 219 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 TALDO1P37837 337 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 PSMD7P51665 324 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 HACD4Q5VWC8 232 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
RAB40C-202ENST00000509637 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 CCL28Q9NRJ3 127 aa11.81□□□□□ -0.52
RAB40C-202ENST00000509637 HERC2O95714 4834 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
RAB40C-202ENST00000509637 IGLC7A0M8Q6 106 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 OR2B8PP59922 312 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 ZNF585BQ52M93 769 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 C22orf42Q6IC83 251 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 WFDC3Q8IUB2 231 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 TCTEX1D2Q8WW35 142 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 NDUFB11Q9NX14 153 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 UBQLN2Q9UHD9 624 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
RAB40C-202ENST00000509637 PDCD5O14737 125 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 TNFSF12O43508 249 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 MFAP2P55001 183 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 TBCEQ15813 527 aaPredicted RBP11.79□□□□□ -0.52
RAB40C-202ENST00000509637 FAM209BQ5JX69 171 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 OR4A47Q6IF82 309 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 CNIH2Q6PI25 160 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 SLC16A13Q7RTY0 426 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 LYG2Q86SG7 212 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 GVQW1Q8N7I0 195 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 OR10W1Q8NGF6 305 aa11.79□□□□□ -0.52
RAB40C-202ENST00000509637 METTL21EPA6NDL7 271 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
RAB40C-202ENST00000509637 HLA-GP17693 338 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 GPR183P32249 361 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 MAS1LP35410 378 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 RPL8P62917 257 aaKnown RBP11.78□□□□□ -0.52
RAB40C-202ENST00000509637 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 TIMM50Q3ZCQ8 353 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 FAM106AQ4KMX7 169 aa11.78□□□□□ -0.52
RAB40C-202ENST00000509637 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms