RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SPIN2BQ9BPZ2 258 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 WDR61Q9GZS3 305 aaKnown RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 GABARAPL1Q9H0R8 117 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 ALX4Q9H161 411 aaPredicted RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF286AQ9HBT8 521 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 TMEM138Q9NPI0 162 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 DAZ1Q9NQZ3 744 aaKnown RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 RPS6KB2Q9UBS0 482 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 LAMTOR2Q9Y2Q5 125 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 MRPS16Q9Y3D3 137 aaKnown RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 RFNGQ9Y644 331 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZCCHC11Q5TAX3 1644 aaKnown RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 AHDC1Q5TGY3 1603 aaPredicted RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 NID2Q14112 1375 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 DHX57Q6P158 1386 aaKnown RBP1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 PLCH2O75038 1416 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 FMN1Q68DA7 1419 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 UHRF1BP1Q6BDS2 1440 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 MIA2Q96PC5 1412 aa1.57□□□□□ -2.16
DEPDC1B-204ENST00000509006 KMT2EQ8IZD2 1858 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 PIKFYVEQ9Y2I7 2098 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 THSD7AQ9UPZ6 1657 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 A0A096LNJ9 63 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 DUXBA0A1W2PPF3 345 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 A0A1W2PQ67 120 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 DHRS12A0PJE2 317 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 DPRXA6NFQ7 191 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 SIGLEC16A6NMB1 481 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 C9JCJ5 164 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF207O43670 478 aaKnown RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 FSTL3O95633 263 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF682O95780 498 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 C1QBP02746 253 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 IGLV7-43P04211 117 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 SMIM10L2AP0DMW4 78 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 SMIM10L2BP0DMW5 78 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF19P17023 458 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF32P17041 273 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 S100A4P26447 101 aaKnown RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 CRABP2P29373 138 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 CASP1P29466 404 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 RPL27AP46776 148 aaKnown RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 RPS10P46783 165 aaKnown RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 RAB13P51153 203 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 EMP1P54849 157 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 TPI1P60174 286 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 HBA1P69905 142 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 DHRS2Q13268 280 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 SPCS2Q15005 226 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 DEFB115Q30KQ5 88 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 Q6ZQT7 251 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 TRAPPC6BQ86SZ2 158 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 MARCH3Q86UD3 253 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 IFT20Q8IY31 132 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 C1orf174Q8IYL3 243 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 UMODL1-AS1Q8N2C9 162 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 EIF4E3Q8N5X7 224 aaKnown RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 MIR7-3HGQ8N6C7 128 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR5A1Q8NGJ0 315 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR13C4Q8NGS5 318 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR4K13Q8NH42 304 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 OR4A5Q8NH83 315 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 ITLN2Q8WWU7 325 aaPredicted RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 TOMM6Q96B49 74 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 PLEKHB2Q96CS7 222 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 DNAJC30Q96LL9 226 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 LYSMD1Q96S90 227 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 PFDN5Q99471 154 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 MGLLQ99685 303 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 EFCAB11Q9BUY7 163 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 RSPO3Q9BXY4 272 aaPredicted RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 FAM60AQ9NP50 221 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 FBXL12Q9NXK8 326 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 MED11Q9P086 117 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 RPUSD1Q9UJJ7 312 aaKnown RBP1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 SNX12Q9UMY4 172 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 PHLDA3Q9Y5J5 127 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 ARID1AO14497 2285 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 NUP160Q12769 1436 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 WDR7Q9Y4E6 1490 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 SCN2AQ99250 2005 aa1.56□□□□□ -2.16
DEPDC1B-204ENST00000509006 TRBV24-1A0A075B6N3 115 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 TRAV38-1A0A0B4J264 116 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 A0A0J9YY10 115 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 A0A1B0GX78 115 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 IRGMA1A4Y4 181 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 UBFD1O14562 309 aaKnown RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 MFSD11O43934 449 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 SH2D1AO60880 128 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 BANF1O75531 89 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 NTF3P20783 257 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST1H2BOP23527 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 NPPCP23582 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 S100A7P31151 101 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 HIST1H2BBP33778 126 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CSN1S1P47710 185 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 GABRA2P47869 451 aa1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 ZNF133P52736 654 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 CMC4P56277 68 aaPredicted RBP1.55□□□□□ -2.16
DEPDC1B-204ENST00000509006 FXYD7P58549 80 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms