RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TMEM229BQ8NBD8 167 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 NEUROG1Q92886 237 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM54Q969K7 222 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 C9orf85Q96MD7 179 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SFXN3Q9BWM7 321 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 OSTCQ9NRP0 149 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PRR20EP86478 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PRR20CP86479 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PRR20DP86480 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PRR20BP86481 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 PRR20AP86496 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ELOCQ15369 112 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TCTEX1D4Q5JR98 221 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TIMM23BQ5SRD1 257 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 FAM222AQ5U5X8 452 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 SCIMPQ6UWF3 145 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TMUB2Q71RG4 321 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 OR1L1Q8NH94 360 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 FLVCR1-AS1Q8TAF5 88 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 GALNT14Q96FL9 552 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 TEX37Q96LM6 180 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ADAT1Q9BUB4 502 aaKnown RBP3.24□□□□□ -1.89
NEDD4-209ENST00000508871 NIPAL2Q9H841 368 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF556Q9HAH1 456 aa3.24□□□□□ -1.89
NEDD4-209ENST00000508871 CARHSP1Q9Y2V2 147 aaKnown RBP3.24□□□□□ -1.89
NEDD4-209ENST00000508871 A0A087WUJ7 227 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM72A0PK05 275 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 P2RX6O15547 441 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SPI1P17947 270 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 C6orf52Q5T4I8 152 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM236Q5W0B7 351 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 COMMD6Q7Z4G1 85 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 LINC01356Q8N9X3 169 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 OR2M3Q8NG83 312 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 KLK6Q92876 244 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 PTX4Q96A99 478 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SLAMF6Q96DU3 332 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SPANXDQ9BXN6 97 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 ZFP30Q9Y2G7 519 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 FER1L5A0AVI2 2057 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 FANCMQ8IYD8 2048 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 TRBV5-5A0A0J9YX44 114 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 A8MWV9 139 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 ZFAND5O76080 213 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 CD200P41217 278 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 PNRC1Q12796 327 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 RTL8BQ17RB0 113 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 C1orf229Q6ZS94 237 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM219Q86XT9 240 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 MSRB3Q8IXL7 192 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 C8orf46Q8TAG6 207 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 ZPLD1Q8TCW7 415 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 RTL8AQ9BWD3 113 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 EML5Q05BV3 1969 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV1OR15-9A0A0B4J2B8 117 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 FGF16O43320 207 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 APOC3P02656 99 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV4-34P06331 123 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV4-31P0DP07 118 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 LAMP1P11279 417 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 ATP6V0CP27449 155 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 PEBP1P30086 187 aaKnown RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 PFN2P35080 140 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SMIM11AP58511 58 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SNRPD2P62316 118 aaKnown RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 MESP2Q0VG99 397 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 OR2F1Q13607 317 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 BEAN1Q3B7T3 259 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 VMA21Q3ZAQ7 101 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 NR2C2APQ86WQ0 139 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 C17orf82Q86X59 251 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SUMF2Q8NBJ7 301 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 CMTM2Q8TAZ6 248 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SIGLEC12Q96PQ1 595 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 PARP11Q9NR21 331 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 COMMD3Q9UBI1 195 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 MTFP1Q9UDX5 166 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 TAC3Q9UHF0 121 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF706Q9Y5V0 76 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGHV3OR16-13A0A075B7E8 117 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 KIR2DL5BA0A0G2JN68 375 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 KIR2DL5BA0A0G2JPC4 375 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SPTY2D1-AS1A0A0U1RR47 76 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF736B4DX44 427 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 GABARAPH6UMI1 98 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 OR2T1O43869 369 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 SCRG1O75711 98 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 IGFBP3P17936 291 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 REG3AQ06141 175 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 KIR2DL5AQ8N109 375 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 KIR2DL5BQ8NHK3 375 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 C15orf40Q8WUR7 153 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 NAT14Q8WUY8 206 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 RMI2Q96E14 147 aa3.23□□□□□ -1.89
NEDD4-209ENST00000508871 RBMXL1Q96E39 390 aaKnown RBP3.23□□□□□ -1.89
NEDD4-209ENST00000508871 FAM30AQ9NZY2 134 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms