RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SSX3Q99909 188 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC25A21Q9BQT8 299 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC5A7Q9GZV3 580 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR2D2Q9H210 308 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SDHAF2Q9NX18 166 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 C1RLQ9NZP8 487 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 PRELID3BQ9Y3B1 194 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 HILPDAQ9Y5L2 63 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A1W2PPE3 182 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 CXorf65A6NEN9 183 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 TIMM23O14925 209 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC31A2O15432 143 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 RBFOX2O43251 390 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 UPK1BO75841 260 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 MOSP00540 346 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGHV3-7P01780 117 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 APOA2P02652 100 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 CTSDP07339 412 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF735P0CB33 412 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 GNRHRP30968 328 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 DUTP33316 252 aaKnown RBP4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 LGALS7P47929 136 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 RND3P61587 244 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 RTL8BQ17RB0 113 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 LDLRAD2Q5SZI1 272 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 UTF1Q5T230 341 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 MZT2BQ6NZ67 158 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 C16orf87Q6PH81 154 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 KCTD9Q7L273 389 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 C5orf24Q7Z6I8 188 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 MOB3BQ86TA1 216 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 PDPNQ86YL7 162 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 CADM3Q8N126 398 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 DRAM1Q8N682 238 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 SIGLECL1Q8N7X8 197 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZDHHC22Q8N966 263 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 CCDC71LQ8N9Z2 235 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 POC5Q8NA72 575 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR2T10Q8NGZ9 312 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 SECTM1Q8WVN6 248 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 CAPSLQ8WWF8 208 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 ABHD14BQ96IU4 210 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF48Q96MX3 618 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 TSC22D3Q99576 134 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 NABP2Q9BQ15 211 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF251Q9BRH9 671 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 HRASLSQ9HDD0 168 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 COPZ2Q9P299 210 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 VPREB3Q9UKI3 123 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 TCF19Q9Y242 345 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 WASHC3Q9Y3C0 194 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 TNCP24821 2201 aa4.38□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGKV1D-13A0A0B4J2D9 117 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 A6NDX4 124 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 H0YJW9 148 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 H3BUX3 64 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 M0R1X1 148 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 FGF16O43320 207 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 PGLYRP1O75594 196 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 ATG12O94817 140 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR2F2O95006 317 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 VENTXO95231 258 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 CRYBA1P05813 215 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 CT45A6P0DMU7 189 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 CT45A5P0DMU8 189 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 CT45A7P0DMV0 189 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGKV1-13P0DP09 117 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 PGAM2P15259 253 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 RPA2P15927 270 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 FXYD4P59646 89 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 DEFA1P59665 94 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 DEFA3P59666 94 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 UBE2MP61081 183 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 ASAH1Q13510 395 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 EIF4EBP1Q13541 118 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 RBMS2Q15434 407 aaKnown RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC9A3R2Q15599 337 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 SCGB2B2Q4G0G5 96 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 ABCA11PQ4W5N1 156 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 RPL39P5Q59GN2 51 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM53AQ6NSI3 398 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 IDO2Q6ZQW0 420 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF818PQ6ZRF7 136 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 DYNAPQ8N1N2 210 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 TMEM217Q8N7C4 229 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 NPBQ8NG41 125 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR51S1Q8NGJ8 323 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR4C13Q8NGP0 309 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR4S2Q8NH73 311 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR56B4Q8NH76 319 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 PIFOQ8TCI5 191 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 WIPF2Q8TF74 440 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 C17orf50Q8WW18 174 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 C22orf15Q8WYQ4 148 aa4.37□□□□□ -1.71
HMGB1P44-201ENST00000508597 FLYWCH2Q96CP2 140 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms