RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 CXCL12P48061 93 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 GABARAPL2P60520 117 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 RPS11P62280 158 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 RPS25P62851 125 aaKnown RBP3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 FKBP1AP62942 108 aaKnown RBP3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 PSG7Q13046 419 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 ELOCQ15369 112 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 SCGB2B2Q4G0G5 96 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 CCSMST1Q4G0I0 132 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 FKBP1CQ5VVH2 108 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 Q6Q795 121 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 MOB1BQ7L9L4 216 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 WDR86Q86TI4 376 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 LHFPL1Q86WI0 220 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 TCTE3Q8IZS6 198 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 NPBQ8NG41 125 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 OR51T1Q8NGJ9 327 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 FAM57AQ8TBR7 257 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 ISOC1Q96CN7 298 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 GNPNAT1Q96EK6 184 aaPredicted RBP3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 TRIB3Q96RU7 358 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 PEBP4Q96S96 227 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 CCL13Q99616 98 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 GGTLC1Q9BX51 225 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 COMMD5Q9GZQ3 224 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 SND1-IT1Q9HBX3 110 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 MRPL16Q9NX20 251 aaKnown RBP3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 PHLPP1O60346 1717 aa3.09□□□□□ -1.91
SMARCA5-202ENST00000508573 ZNF609O15014 1411 aa3.09□□□□□ -1.92
SMARCA5-202ENST00000508573 NEO1Q92859 1461 aa3.09□□□□□ -1.92
SMARCA5-202ENST00000508573 ARAP3Q8WWN8 1544 aa3.09□□□□□ -1.92
SMARCA5-202ENST00000508573 IGHV3-74A0A0B4J1X5 117 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM269A0A1B0GVZ9 245 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM72A0PK05 275 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 C20orf202A1L168 122 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 J3QRK9 145 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 COX7A2LO14548 114 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 OVOL1O14753 267 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 GSTZ1O43708 216 aaPredicted RBP3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 GGCTO75223 188 aaKnown RBP3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 LTAP01374 205 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 HLA-DPB1P04440 258 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 FKBP2P26885 142 aaKnown RBP3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 OPRK1P41145 380 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 CCR2P41597 374 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 GNA12Q03113 381 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM241Q24JQ0 296 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 C14orf177Q52M58 125 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 TMEM69Q5SWH9 247 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 LYPD2Q6UXB3 125 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 PDZD9Q8IXQ8 264 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 LYG1Q8N1E2 194 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 OR4E2Q8NGC2 313 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 OR10D4PQ8NGN7 298 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 SGMS2Q8NHU3 365 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 MS4A6EQ96DS6 147 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 ZC2HC1AQ96GY0 325 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 ABHD14BQ96IU4 210 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 OR2A5Q96R48 311 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 PARP12Q9H0J9 701 aaKnown RBP3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 TVP23BQ9NYZ1 205 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 CACNG5Q9UF02 275 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 DNAJC12Q9UKB3 198 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 PCTPQ9UKL6 214 aa3.08□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV1-6A0A0C4DH72 117 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 LY6LH3BQJ8 138 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 GABARAPH6UMI1 98 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 J3QQQ9 107 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 CORTO00230 105 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 SOCS3O14543 225 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 BCL2L11O43521 198 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 NRASP01111 189 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV1-39P01597 117 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 AMBPP02760 352 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 IGKV1D-39P04432 117 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 BCL2P10415 239 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 KRTAP10-3P60369 221 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 MRPS10P82664 201 aaKnown RBP3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 CAV1Q03135 178 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 BIKQ13323 160 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 ZNF181Q2M3W8 571 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 FAM182AQ5T1J6 154 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 SNX29P2Q8IUI4 249 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 OR4C16Q8NGL9 310 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 MRPL30Q8TCC3 161 aaKnown RBP3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 RTN4IP1Q8WWV3 396 aaPredicted RBP3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 HIST1H2BAQ96A08 127 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 SMIM14Q96QK8 99 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 GPX7Q96SL4 187 aaPredicted RBP3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 NRIP2Q9BQI9 281 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 TM2D3Q9BRN9 247 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 PRADC1Q9BSG0 188 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 OR2J1Q9GZK6 312 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 WDR61Q9GZS3 305 aaKnown RBP3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 LINC00597Q9H2U6 94 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 OR5AC2Q9NZP5 309 aa3.07□□□□□ -1.92
SMARCA5-202ENST00000508573 TP73-AS1Q9UF72 201 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms