RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 IGHG2P01859 326 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 HIST1H1DP16402 221 aaKnown RBP3.53□□□□□ -1.84
NUP54-206ENST00000508465 ZBTB25P24278 435 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 SOX6P35712 828 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 ZNF137PP52743 207 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 MRPS15P82914 257 aaKnown RBP3.53□□□□□ -1.84
NUP54-206ENST00000508465 PJVKQ0ZLH3 352 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 MMDQ15546 238 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 TMEM30BQ3MIR4 351 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 Q3ZCU0 254 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 KCTD21Q4G0X4 260 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 LY6G6FQ5SQ64 297 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 SFXN4Q6P4A7 337 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 MOB1BQ7L9L4 216 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 ZNF554Q86TJ5 538 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 TPRA1Q86W33 373 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 CADM3Q8N126 398 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 STPG2Q8N412 459 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 OR4F17Q8NGA8 305 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 OR4A4PQ8NGN8 299 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 OR10J5Q8NHC4 309 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 LGALS14Q8TCE9 139 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 CASTOR1Q8WTX7 329 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 CHPT1Q8WUD6 406 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 PHF21AQ96BD5 680 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 YIPF6Q96EC8 236 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 C5orf30Q96GV9 206 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 OR5B12Q96R08 314 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 OR4F4Q96R69 305 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 AGMATQ9BSE5 352 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 ABCG5Q9H222 651 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 FBXL15Q9H469 300 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 RDH8Q9NYR8 311 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 FBXL17Q9UF56 701 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 ZNF107Q9UII5 783 aaPredicted RBP3.53□□□□□ -1.84
NUP54-206ENST00000508465 ZNF221Q9UK13 617 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 GAB2Q9UQC2 676 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 TSSC4Q9Y5U2 329 aaPredicted RBP3.53□□□□□ -1.84
NUP54-206ENST00000508465 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 TRBV6-7A0A0A0MS04 114 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 MEIS3P1A6NDR6 274 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 H0YJW9 148 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 NBR2O15453 112 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 AIREO43918 545 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 IGKV1-16P04430 117 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 NFYAP23511 347 aaPredicted RBP3.52□□□□□ -1.85
NUP54-206ENST00000508465 RAB25P57735 213 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 RPL23AP62750 156 aaKnown RBP3.52□□□□□ -1.85
NUP54-206ENST00000508465 SLC35B1P78383 322 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PLGLAQ15195 96 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PSG5Q15238 335 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PNLIPRP3Q17RR3 467 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 C5orf64Q2M2E5 130 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 DEFB136Q30KP8 78 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PDLIM3Q53GG5 364 aaPredicted RBP3.52□□□□□ -1.85
NUP54-206ENST00000508465 SERTAD4-AS1Q5TG53 156 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 HACD4Q5VWC8 232 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PET117Q6UWS5 81 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 FOXRED2Q8IWF2 684 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 FAM71E2Q8N5Q1 922 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 GVQW1Q8N7I0 195 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 KLHL30-AS1Q8NEE0 82 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 OR4X2Q8NGF9 303 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PTX4Q96A99 478 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 SLC25A38Q96DW6 304 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 GINS4Q9BRT9 223 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 NAA50Q9GZZ1 169 aaKnown RBP3.52□□□□□ -1.85
NUP54-206ENST00000508465 PARP11Q9NR21 331 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 SDHAF2Q9NX18 166 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 RHBDL2Q9NX52 303 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 PIPOXQ9P0Z9 390 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 KIAA1456Q9P272 454 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 METTL1Q9UBP6 276 aaKnown RBP3.52□□□□□ -1.85
NUP54-206ENST00000508465 SPATA2Q9UM82 520 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 FBXO7Q9Y3I1 522 aa3.52□□□□□ -1.85
NUP54-206ENST00000508465 RBM7Q9Y580 266 aaKnown RBP3.52□□□□□ -1.85
NUP54-206ENST00000508465 IGHV7-81A0A0B4J1V7 117 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 TRAV41A0A0B4J266 112 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 IGKV1D-13A0A0B4J2D9 117 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 SRRM4A7MD48 611 aaKnown RBP3.51□□□□□ -1.85
NUP54-206ENST00000508465 CCL24O00175 119 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 ITGB1BP1O14713 200 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 ATP6V0E1O15342 81 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 PLXNB1O43157 2135 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 TXNL1O43396 289 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 SLC25A17O43808 307 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 TNFAIP8O95379 198 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 IGLV2-11P01706 119 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 TFAP2AP05549 437 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 APELAP0DMC3 54 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 IGKV1-13P0DP09 117 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 DTYMKP23919 212 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 MC5RP33032 325 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 RANBP1P43487 201 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 SERPINB10P48595 397 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 CAMPP49913 170 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 GNG2P59768 71 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 VBP1P61758 197 aa3.51□□□□□ -1.85
NUP54-206ENST00000508465 NCS1P62166 190 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms