RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	MSGN1	A6NI15	193 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	CRYZL1	O95825	349 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	IGHV3-11	P01762	117 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	IGKV1-13	P0DP09	117 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	EIF4EBP1	Q13541	118 aa	Predicted RBP	6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	KLF5	Q13887	457 aa	Predicted RBP	6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	TOR2A	Q5JU69	321 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	C11orf87	Q6NUJ2	197 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ZNF343	Q6P1L6	599 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	HOGA1	Q86XE5	327 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ADAD2	Q8NCV1	583 aa	Known RBP	6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	OR5H6	Q8NGV6	325 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SLC25A38	Q96DW6	304 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	CMTM3	Q96MX0	182 aa		6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	HSD17B10	Q99714	261 aa	Known RBP	6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	RBMX2	Q9Y388	322 aa	Known RBP	6.1	□□□□□ -1.43
UBE2D3-222	ENST00000508238	TRAV18	A0A075B6X5	111 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	TRBV9	A0A0B4J1U6	114 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	C13orf42	A0A1B0GVH6	325 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	AIRE	O43918	545 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SAP30	O75446	220 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ACTL6B	O94805	426 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	OR9G9	P0C7N8	305 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	NFYA	P23511	347 aa	Predicted RBP	6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	BRWD1-AS2	P59051	145 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	RPL30	P62888	115 aa	Known RBP	6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	MXD1	Q05195	221 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	DYRK1A	Q13627	763 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	CDK10	Q15131	360 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	NEDD8	Q15843	81 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	FAM209B	Q5JX69	171 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	IDNK	Q5T6J7	187 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ZNF66	Q6ZN08	573 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	MMD2	Q8IY49	270 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	TTC9C	Q8N5M4	171 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SYT8	Q8NBV8	401 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ZBTB34	Q8NCN2	500 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	BEST4	Q8NFU0	473 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	OR6Q1	Q8NGQ2	317 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	C15orf40	Q8WUR7	153 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SRSF12	Q8WXF0	261 aa	Known RBP	6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ACOT12	Q8WYK0	555 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	WWC2-AS2	Q96NR7	200 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	OR4C12	Q96R67	309 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SPIN2A	Q99865	258 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SPIN2B	Q9BPZ2	258 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ELOVL1	Q9BW60	279 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	RNF167	Q9H6Y7	350 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	AUNIP	Q9H7T9	357 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ZNF430	Q9H8G1	570 aa	Predicted RBP	6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	ZNF355P	Q9NSJ1	428 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SPATA2	Q9UM82	520 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	MRPS7	Q9Y2R9	242 aa	Known RBP	6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	SMAD5-AS1	Q9Y6J3	95 aa		6.09	□□□□□ -1.43
UBE2D3-222	ENST00000508238	RBFOX2	O43251	390 aa	Known RBP eCLIP	6.08	□□□□□ -1.44	1e-7	■□□□□ 10
UBE2D3-222	ENST00000508238	XRCC3	O43542	346 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	FCGR3B	O75015	233 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	IGLV1-51	P01701	117 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	SAA1	P0DJI8	122 aa	Predicted RBP	6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	SPN	P16150	400 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	S100G	P29377	79 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	MAS1L	P35410	378 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	KIR2DS2	P43631	304 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	TATDN3	Q17R31	274 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	KLK9	Q2XQG4	91 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	IL34	Q6ZMJ4	242 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	IDO2	Q6ZQW0	420 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	KCTD9	Q7L273	389 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	PUSL1	Q8N0Z8	303 aa	Known RBP	6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	OR4S2	Q8NH73	311 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	VSTM2A	Q8TAG5	236 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	TMEM167A	Q8TBQ9	72 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	CD300LF	Q8TDQ1	290 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	GIMAP1	Q8WWP7	306 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	SNAPC3	Q92966	411 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	DCUN1D5	Q9BTE7	237 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	SIGLEC8	Q9NYZ4	499 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	PEF1	Q9UBV8	284 aa	Known RBP	6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	KLK9	Q9UKQ9	250 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238		U3KQK5	164 aa		6.08	□□□□□ -1.44
UBE2D3-222	ENST00000508238	FAM223B	A6NKX1	122 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	TRIM64C	A6NLI5	447 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238		A8MZ25	164 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238		J3QRK9	145 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	RBMXL2	O75526	392 aa	Known RBP	6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	KBTBD11	O94819	623 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	OR2A4	O95047	310 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	HRAS	P01112	189 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	PPY	P01298	95 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	FGF2	P09038	288 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	GP9	P14770	177 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	FCGR2C	P31995	323 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	RPS19	P39019	145 aa	Known RBP	6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	TNXA	Q16473	311 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	LPCAT3	Q6P1A2	487 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	MZT2A	Q6P582	158 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	DHRS11	Q6UWP2	260 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	SLC25A42	Q86VD7	318 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	FAM223A	Q8IWN6	122 aa		6.07	□□□□□ -1.44
UBE2D3-222	ENST00000508238	GVQW1	Q8N7I0	195 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms