RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
PDLIM7-215ENST00000506161 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
PDLIM7-215ENST00000506161 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
PDLIM7-215ENST00000506161 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-215ENST00000506161 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-215ENST00000506161 SMAD5-AS1Q9Y6J3 95 aa12.74□□□□□ -0.37
PDLIM7-215ENST00000506161 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 MPPED1O15442 326 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 SLC22A5O76082 557 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 OR2A4O95047 310 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 TNFAIP8O95379 198 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 CSN3P07498 182 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 EXOSC2Q13868 293 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 TIMM50Q3ZCQ8 353 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 OR4A47Q6IF82 309 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 GIMAP1Q8WWP7 306 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 SLC25A46Q96AG3 418 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 OR2A7Q96R45 310 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 U3KQK5 164 aa12.73□□□□□ -0.37
PDLIM7-215ENST00000506161 PPP5D1E7EU14 171 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 NDUFB8O95169 186 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 IGHV3-23P01764 117 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 HLA-AP01891 365 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 PMP2P02689 132 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 REG1AP05451 166 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 RPA2P15927 270 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 NAT1P18440 290 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 ZP3P21754 424 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 GNRHRP30968 328 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 RPL27AP46776 148 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 LYSMD2Q8IV50 215 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 SPAG16Q8N0X2 631 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 OR9G4Q8NGQ1 327 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 OR6Q1Q8NGQ2 317 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 FYTTD1Q96QD9 318 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 THAP7Q9BT49 309 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 SELENOKQ9Y6D0 94 aa12.72□□□□□ -0.37
PDLIM7-215ENST00000506161 S1PR2O95136 353 aa12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 NHLRC4P0CG21 123 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 DCTN2Q13561 401 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 MSMO1Q15800 293 aa12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 OR51H1Q8NH63 302 aa12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 S100A16Q96FQ6 103 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 CCDC140Q96MF4 163 aa12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 KRTAP17-1Q9BYP8 105 aa12.71□□□□□ -0.37
PDLIM7-215ENST00000506161 CBX5P45973 191 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 TMEM69Q5SWH9 247 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 SPIN2AQ99865 258 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 SPIN2BQ9BPZ2 258 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 ZNF2Q9BSG1 426 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 BET1LQ9NYM9 111 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 COMMD3Q9UBI1 195 aa12.7□□□□□ -0.38
PDLIM7-215ENST00000506161 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 FAM223BA6NKX1 122 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 NPIPB5A8MRT5 1133 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 HPGDSO60760 199 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 TMEM127O75204 238 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 ACTL6BO94805 426 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 CTRB1P17538 263 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 ELK1P19419 428 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 OR2B8PP59922 312 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 ATP5G2Q06055 141 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 C15orf32Q32M92 178 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 DHRS11Q6UWP2 260 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 FAM223AQ8IWN6 122 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 GPX8Q8TED1 209 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 MOB3AQ96BX8 217 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 ZNF257Q9Y2Q1 563 aa12.69□□□□□ -0.38
PDLIM7-215ENST00000506161 TENM2Q9NT68 2774 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 IGLC7A0M8Q6 106 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 UPK2O00526 184 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■□□ 18.7
PDLIM7-215ENST00000506161 RLN1P04808 185 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 CRYGCP07315 174 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 HLA-GP17693 338 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 PSMB6P28072 239 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 CTF1Q16619 201 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 KLK9Q2XQG4 91 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 ZNF585BQ52M93 769 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 ANKRD13BQ86YJ7 626 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 ZBTB34Q8NCN2 500 aa12.68□□□□□ -0.38
PDLIM7-215ENST00000506161 OR10W1Q8NGF6 305 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms