RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 AURKAIP1Q9NWT8 199 aaPredicted RBP13.18□□□□□ -0.3
SYNE4-207ENST00000505054 NUBP2Q9Y5Y2 271 aa13.18□□□□□ -0.3
SYNE4-207ENST00000505054 KMT2CQ8NEZ4 4911 aaKnown RBP13.18□□□□□ -0.3
SYNE4-207ENST00000505054 TCRBV4S1A1TA0A5B7 111 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 KBTBD11O94819 623 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 OR2A4O95047 310 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 IGHG4P01861 327 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 CTSDP07339 412 aaPredicted RBP13.17□□□□□ -0.3
SYNE4-207ENST00000505054 LPAR6P43657 344 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 PIGPP57054 158 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 TAS2R31P59538 309 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 AP3S2P59780 193 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 POU2AF1Q16633 256 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 NSUN5P1Q3KNT7 163 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 TCTEX1D1Q8N7M0 179 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 RNF152Q8N8N0 203 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 MINDY2Q8NBR6 621 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 OR4F17Q8NGA8 305 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 TMEM167AQ8TBQ9 72 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 ZFAND1Q8TCF1 268 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 OR2A7Q96R45 310 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 MCUBQ9NWR8 336 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 COMMD9Q9P000 198 aa13.17□□□□□ -0.3
SYNE4-207ENST00000505054 A0A1W2PRX2 142 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 MPPED1O15442 326 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 SOX15O60248 233 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 CNIH1O95406 144 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 NQO2P16083 231 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 ECI1P42126 302 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 ZNF45Q02386 682 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 FOXE3Q13461 319 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
SYNE4-207ENST00000505054 TNXAQ16473 311 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 C10orf55Q5SWW7 151 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 OR4A47Q6IF82 309 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 MMD2Q8IY49 270 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 LFNGQ8NES3 379 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 VSTM2AQ8TAG5 236 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
SYNE4-207ENST00000505054 C5orf66Q9H5L9 145 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 FAM212BQ9NTI7 297 aaPredicted RBP13.16□□□□□ -0.3
SYNE4-207ENST00000505054 SCP2D1Q9UJQ7 156 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 GPR132Q9UNW8 380 aa13.16□□□□□ -0.3
SYNE4-207ENST00000505054 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
SYNE4-207ENST00000505054 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
SYNE4-207ENST00000505054 IGLV1-40P01703 118 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
SYNE4-207ENST00000505054 ELANEP08246 267 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
SYNE4-207ENST00000505054 RPA2P15927 270 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 PSMB8P28062 276 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 FAUP35544 74 aaKnown RBP13.15□□□□□ -0.3
SYNE4-207ENST00000505054 KHDC1LQ5JSQ8 128 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 TRIQKQ629K1 86 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 ZNF57Q68EA5 555 aaPredicted RBP13.15□□□□□ -0.3
SYNE4-207ENST00000505054 UNQ5815/PRO19632Q6UWF5 114 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 LINC00299Q6ZSB3 139 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 SRSF12Q8WXF0 261 aaKnown RBP13.15□□□□□ -0.3
SYNE4-207ENST00000505054 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 TMEM140Q9NV12 185 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 BET1LQ9NYM9 111 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
SYNE4-207ENST00000505054 TRAV3A0A0B4J244 114 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 A0A1W2PN81 502 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 MARCH11A6NNE9 402 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 H0Y980 276 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 IL7P13232 177 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 CHRNA7P36544 502 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
SYNE4-207ENST00000505054 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 C18orf65Q6ZTR6 163 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 CCDC71LQ8N9Z2 235 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 TP53RKQ96S44 253 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 AIFM2Q9BRQ8 373 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 KLK15Q9H2R5 256 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 C14orf166Q9Y224 244 aaKnown RBP13.14□□□□□ -0.31
SYNE4-207ENST00000505054 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
SYNE4-207ENST00000505054 VSIG4Q9Y279 399 aa13.14□□□□□ -0.31
SYNE4-207ENST00000505054 C3orf85A0A1B0GTC6 90 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 UPK2O00526 184 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 MYOD1P15172 320 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 G6PCP35575 357 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 TMEM267Q0VDI3 215 aaPredicted RBP13.13□□□□□ -0.31
SYNE4-207ENST00000505054 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
SYNE4-207ENST00000505054 DMBX1Q8NFW5 382 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 OR4A5Q8NH83 315 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 MYOZ3Q8TDC0 251 aa13.13□□□□□ -0.31
SYNE4-207ENST00000505054 A0A1B0GW64 132 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 MSGN1A6NI15 193 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 ACTL6BO94805 426 aa13.12□□□□□ -0.31
SYNE4-207ENST00000505054 KRASP01116 189 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms