RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 VAX2Q9UIW0 290 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 ZNF391Q9UJN7 358 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 NXT1Q9UKK6 140 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 SLC7A11Q9UPY5 501 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 POLDIP2Q9Y2S7 368 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 LHFPL6Q9Y693 200 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 URGCP-MRPS24S4R325 110 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 ANKRD17O75179 2603 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 DOCK3Q8IZD9 2030 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 LTBP2Q14767 1821 aa3.4□□□□□ -1.86
RFC1-208ENST00000504849 IGHV4OR15-8A0A075B7B6 117 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 IGHV4-61A0A0C4DH41 118 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 TRBV11-1A0A0K0K1C0 115 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 A0A1B0GU03 582 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 IFITM10A6NMD0 228 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 ZNF727A8MUV8 499 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 H7BYZ3 331 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SEMA4FO95754 770 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 IGLV3-1P01715 115 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 IGHV4-59P01825 116 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 MBP02144 154 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SOD3P08294 240 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 CTXN2P0C2S0 81 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 FRMD6-AS1P0C7T7 363 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PGA4P0DJD7 388 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PAX1P15863 534 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 KLK2P20151 261 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SRP14P37108 136 aaKnown RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 GABRA4P48169 554 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 IDH3GP51553 393 aaPredicted RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 DYNLT3P51808 116 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 EFNA3P52797 238 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PPP1CAP62136 330 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 RAB11AP62491 216 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 RANP62826 216 aaKnown RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 HBG1P69891 147 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 HBG2P69892 147 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 FOXF1Q12946 379 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 NSDHLQ15738 373 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 MPV17LQ2QL34 196 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SP6Q3SY56 376 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 SPIN3Q5JUX0 258 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PLCXD3Q63HM9 321 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 ZNF343Q6P1L6 599 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SPSB3Q6PJ21 355 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SPNS3Q6ZMD2 512 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 C9orf47Q6ZRZ4 202 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 Q6ZSR3 168 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SLC25A26Q70HW3 274 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 C6orf201Q7Z4U5 140 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 LYZL2Q7Z4W2 148 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 OSR2Q8N2R0 312 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 SLC35G3Q8N808 338 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 OR5D18Q8NGL1 313 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 OR5C1Q8NGR4 320 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 OR2V1Q8NHB1 315 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PATE1Q8WXA2 126 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 FRZBQ92765 325 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 DNAJA3Q96EY1 480 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 BORCS8Q96FH0 119 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 ADGRG7Q96K78 797 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 TMEM56Q96MV1 263 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 HIST1H2BLQ99880 126 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 AGMATQ9BSE5 352 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PSMG3Q9BT73 122 aaPredicted RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 TMEM222Q9H0R3 208 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 OCIAD1Q9NX40 245 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 IL36GQ9NZH8 169 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 GNG13Q9P2W3 67 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 NAT8Q9UHE5 227 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 GAB2Q9UQC2 676 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 TMEM56-RWDD3S4R434 201 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 MDC1Q14676 2089 aaKnown RBP3.4□□□□□ -1.87
RFC1-208ENST00000504849 DENND4CQ5VZ89 1909 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 CHD9Q3L8U1 2897 aa3.4□□□□□ -1.87
RFC1-208ENST00000504849 FRYQ5TBA9 3013 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 NINQ8N4C6 2090 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 IGLV3-32A0A0A0MS00 114 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 IGKV1D-43A0A0B4J1Z2 117 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 IGKV1-9A0A0C4DH69 117 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 SPTY2D1-AS1A0A0U1RR47 76 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 KIR2DS1A0A191URI9 304 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 LOC102725191A0A1B0GVB3 256 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 A0A1B0GX78 115 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 IGSF23A1L1A6 192 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 NKX2-6A6NCS4 301 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 GJE1A6NN92 205 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 ZNF705GA8MUZ8 300 aaPredicted RBP3.39□□□□□ -1.87
RFC1-208ENST00000504849 A8MWP6 167 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 H0Y980 276 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 M0R135 149 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 RER1O15258 196 aa3.39□□□□□ -1.87
RFC1-208ENST00000504849 TRAF3IP2O43734 574 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms