RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CD33P20138 364 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 CRIP2P52943 208 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 NDPQ00604 133 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 PJVKQ0ZLH3 352 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 RBMS2Q15434 407 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 PRSS8Q16651 343 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 MMD2Q8IY49 270 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 OR4A5Q8NH83 315 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM167AQ8TBQ9 72 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 NOL4LQ96MY1 436 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 TP53RKQ96S44 253 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 CITED1Q99966 193 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 GON7Q9BXV9 100 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 NAA60Q9H7X0 242 aa9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 ZNF430Q9H8G1 570 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-208ENST00000504489 TEX13DA0A0J9YY54 714 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 PSMB11A5LHX3 300 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 ARPC1BO15143 372 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 LYRM1O43325 122 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 UPK1BO75841 260 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 KBTBD11O94819 623 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 CNIH1O95406 144 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 SERPINE2P07093 398 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 FGF2P09038 288 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 EGR2P11161 476 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 UCP1P25874 307 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 BTCP35070 178 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 MAS1LP35410 378 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 CCR6P51684 374 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 ERVK-16P61578 105 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 FXYD3Q14802 87 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 SSX9Q7RTT3 188 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 SGPP2Q8IWX5 399 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 ADAD2Q8NCV1 583 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 OR5AU1Q8NGC0 362 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 GLYATL2Q8WU03 294 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM230Q96A57 120 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 GALNT14Q96FL9 552 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 PARP11Q9NR21 331 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 KCNIP3Q9Y2W7 256 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 NUBP2Q9Y5Y2 271 aa9.36□□□□□ -0.91
PDLIM5-208ENST00000504489 UPK2O00526 184 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 NDUFB6O95139 128 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 KRASP01116 189 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 IGKV1-39P01597 117 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 IGKV1D-39P04432 117 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 OR5AC1P0C628 307 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 VDAC1P21796 283 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 PPIFP30405 207 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 SLC35B1P78383 322 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 DHODHQ02127 395 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 CFHR3Q02985 330 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM267Q0VDI3 215 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 ASAH1Q13510 395 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 SP6Q3SY56 376 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 AKIRIN2Q53H80 203 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM128Q5BJH2 165 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 COMMD1Q8N668 190 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 ARPC1AQ92747 370 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 SEC22AQ96IW7 307 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM140Q9NV12 185 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 FBXO7Q9Y3I1 522 aa9.35□□□□□ -0.91
PDLIM5-208ENST00000504489 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 G3V318 75 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 FBXO24O75426 580 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 ACTL6BO94805 426 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 ATG12O94817 140 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 CDS2O95674 445 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 AKR1C4P17516 323 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 G6PCP35575 357 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 UBE2MP61081 183 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 GNB1P62873 340 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 RPL8P62917 257 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 SUPT4H1P63272 117 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 CD83Q01151 205 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 IFITM3Q01628 133 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 SRSF4Q08170 494 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 TNXAQ16473 311 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 CENPSQ8N2Z9 138 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 MINDY2Q8NBR6 621 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 ABHD5Q8WTS1 349 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 SRSF12Q8WXF0 261 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 TMEM68Q96MH6 324 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 TBC1D24Q9ULP9 559 aa9.34□□□□□ -0.91
PDLIM5-208ENST00000504489 WSB1Q9Y6I7 421 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms